Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm26213-201ENSMUST00000158582 110 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm22668-201ENSMUST00000158716 260 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm23819-201ENSMUST00000158744 109 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm18356-201ENSMUST00000185677 623 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm43245-201ENSMUST00000197603 468 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm44326-201ENSMUST00000198226 101 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Igkv13-82-201ENSMUST00000200308 346 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Col6a4A2AX52 AC168880.1-201ENSMUST00000225113 707 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 AC120553.1-201ENSMUST00000227313 260 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm25851-201ENSMUST00000082794 107 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm23042-201ENSMUST00000083866 101 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Mir653-201ENSMUST00000102402 85 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm15529-201ENSMUST00000121833 994 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm23568-201ENSMUST00000177960 92 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm24829-201ENSMUST00000179245 92 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm38274-201ENSMUST00000195689 148 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm43004-201ENSMUST00000201872 703 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm19855-201ENSMUST00000210145 249 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm46997-201ENSMUST00000222108 217 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Col6a4A2AX52 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm25589-201ENSMUST00000082502 166 ntBASIC0.44□□□□□ -2.34
Col6a4A2AX52 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.44□□□□□ -2.34
Col6a4A2AX52 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm38323-201ENSMUST00000192450 210 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm45366-201ENSMUST00000209828 384 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm25357-201ENSMUST00000082745 72 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm26328-201ENSMUST00000082821 107 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm25794-201ENSMUST00000083286 107 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm25651-201ENSMUST00000083782 119 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Mir465-201ENSMUST00000093563 74 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm13246-201ENSMUST00000120994 315 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm11358-201ENSMUST00000122310 373 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm25874-201ENSMUST00000178030 79 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm42509-201ENSMUST00000197390 781 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Snord1a-201ENSMUST00000083160 74 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm23245-201ENSMUST00000083370 135 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm22577-201ENSMUST00000083731 109 ntBASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Col6a4A2AX52 Gm14638-201ENSMUST00000121338 216 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm24549-201ENSMUST00000158647 139 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm23419-201ENSMUST00000175523 84 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm24388-201ENSMUST00000177872 107 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm27420-201ENSMUST00000183823 79 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Mir7675-201ENSMUST00000184262 58 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm27517-201ENSMUST00000184347 236 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm43199-201ENSMUST00000200019 307 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm11351-202ENSMUST00000225724 478 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm10092-201ENSMUST00000077110 180 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Col6a4A2AX52 Snora41-201ENSMUST00000082668 132 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm11606-201ENSMUST00000120706 617 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 AA413626-201ENSMUST00000121125 494 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm24481-201ENSMUST00000157210 102 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm21815-201ENSMUST00000178213 664 ntBASIC0.42□□□□□ -2.34
Col6a4A2AX52 Gm28560-201ENSMUST00000186091 315 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms