Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Mir8116-201ENSMUST00000184134 97 ntBASIC1.26□□□□□ -2.21
Scn3aA2ASI5 Gm37128-201ENSMUST00000192599 232 ntBASIC1.26□□□□□ -2.21
Scn3aA2ASI5 Mir3961-201ENSMUST00000198795 59 ntBASIC1.26□□□□□ -2.21
Scn3aA2ASI5 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.26□□□□□ -2.21
Scn3aA2ASI5 Gm22980-201ENSMUST00000082608 70 ntBASIC1.26□□□□□ -2.21
Scn3aA2ASI5 Snord14a-201ENSMUST00000082807 87 ntBASIC1.26□□□□□ -2.21
Scn3aA2ASI5 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Scn3aA2ASI5 Gm13378-201ENSMUST00000117483 336 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm13672-201ENSMUST00000117554 459 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm14624-201ENSMUST00000117746 192 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm22338-201ENSMUST00000157715 129 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm24726-201ENSMUST00000158232 121 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Rnu7-201ENSMUST00000158458 62 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm44429-201ENSMUST00000203542 186 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm14923-201ENSMUST00000118270 155 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm25768-201ENSMUST00000158570 98 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Mir28b-201ENSMUST00000175399 80 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm21737-201ENSMUST00000178112 664 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm21815-201ENSMUST00000178213 664 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm21729-201ENSMUST00000180058 664 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm21853-201ENSMUST00000180071 664 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm20901-201ENSMUST00000180177 664 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm29495-201ENSMUST00000189319 664 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm28090-201ENSMUST00000189458 664 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm21647-201ENSMUST00000189755 664 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm43914-201ENSMUST00000203592 594 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm2829-201ENSMUST00000213121 499 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm22997-201ENSMUST00000082845 107 ntBASIC1.25□□□□□ -2.21
Scn3aA2ASI5 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm6829-201ENSMUST00000119858 360 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm11891-201ENSMUST00000121241 619 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm8121-201ENSMUST00000153583 499 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm24551-201ENSMUST00000158645 92 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm26435-201ENSMUST00000179026 107 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm27711-201ENSMUST00000183802 118 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Mir6394-201ENSMUST00000184738 99 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm9251-201ENSMUST00000197202 628 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm44962-201ENSMUST00000206460 279 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Snord68-201ENSMUST00000082516 86 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm24623-201ENSMUST00000082616 194 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm22972-201ENSMUST00000083297 131 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm23453-201ENSMUST00000083326 106 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Mir429-201ENSMUST00000083493 83 ntBASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Scn3aA2ASI5 Gm15899-201ENSMUST00000128586 238 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Gm23893-201ENSMUST00000158106 134 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Gm23016-201ENSMUST00000158431 62 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Gm23022-201ENSMUST00000158768 180 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Snord87-201ENSMUST00000175437 87 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Gm36891-201ENSMUST00000191995 655 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Gm37361-201ENSMUST00000194345 132 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Mir300-201ENSMUST00000083485 79 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Gm13475-201ENSMUST00000119290 234 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Gm25658-201ENSMUST00000158472 128 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Gm38395-201ENSMUST00000199904 830 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Gm44446-201ENSMUST00000204864 255 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Gm19441-201ENSMUST00000221545 330 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Mir107-201ENSMUST00000083660 87 ntBASIC1.23□□□□□ -2.21
Scn3aA2ASI5 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Scn3aA2ASI5 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Scn3aA2ASI5 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Scn3aA2ASI5 Gm24577-201ENSMUST00000158580 63 ntBASIC1.22□□□□□ -2.21
Scn3aA2ASI5 Gm25253-201ENSMUST00000179958 107 ntBASIC1.22□□□□□ -2.21
Scn3aA2ASI5 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Scn3aA2ASI5 Gm42570-201ENSMUST00000195937 292 ntBASIC1.22□□□□□ -2.21
Scn3aA2ASI5 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.22□□□□□ -2.21
Scn3aA2ASI5 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.22□□□□□ -2.21
Scn3aA2ASI5 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Scn3aA2ASI5 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.21□□□□□ -2.22
Scn3aA2ASI5 Gm23328-201ENSMUST00000157418 132 ntBASIC1.21□□□□□ -2.22
Scn3aA2ASI5 Gm26089-201ENSMUST00000157898 107 ntBASIC1.21□□□□□ -2.22
Scn3aA2ASI5 Gm24837-201ENSMUST00000158683 81 ntBASIC1.21□□□□□ -2.22
Scn3aA2ASI5 Gm23340-201ENSMUST00000158955 123 ntBASIC1.21□□□□□ -2.22
Scn3aA2ASI5 Mir6240-201ENSMUST00000184281 117 ntBASIC1.21□□□□□ -2.22
Scn3aA2ASI5 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.21□□□□□ -2.22
Scn3aA2ASI5 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.21□□□□□ -2.22
Scn3aA2ASI5 Gm45704-201ENSMUST00000212582 403 ntBASIC1.21□□□□□ -2.22
Scn3aA2ASI5 CT009696.1-201ENSMUST00000215745 256 ntBASIC1.21□□□□□ -2.22
Scn3aA2ASI5 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Scn3aA2ASI5 Gm23614-201ENSMUST00000082598 107 ntBASIC1.21□□□□□ -2.22
Scn3aA2ASI5 Gm22299-201ENSMUST00000082663 136 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms