Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm29107-201ENSMUST00000190910 347 ntBASIC1.57□□□□□ -2.16
Trbv17A0A140T8P8 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trbv17A0A140T8P8 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.57□□□□□ -2.16
Trbv17A0A140T8P8 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.57□□□□□ -2.16
Trbv17A0A140T8P8 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.57□□□□□ -2.16
Trbv17A0A140T8P8 Gm22299-201ENSMUST00000082663 136 ntBASIC1.57□□□□□ -2.16
Trbv17A0A140T8P8 Mir222-201ENSMUST00000083537 79 ntBASIC1.57□□□□□ -2.16
Trbv17A0A140T8P8 Snord7-201ENSMUST00000083781 97 ntBASIC1.57□□□□□ -2.16
Trbv17A0A140T8P8 Snora33-201ENSMUST00000093556 129 ntBASIC1.57□□□□□ -2.16
Trbv17A0A140T8P8 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Gm25421-201ENSMUST00000104218 164 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Mir344e-201ENSMUST00000104677 66 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Gm22032-201ENSMUST00000116946 116 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Gm14782-201ENSMUST00000120151 195 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Gm15281-201ENSMUST00000125181 351 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Gm25113-201ENSMUST00000157185 143 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Mir1949-201ENSMUST00000157434 141 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Gm22447-201ENSMUST00000158155 92 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Gm26400-201ENSMUST00000175012 85 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Gm27722-201ENSMUST00000183908 76 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Gm24151-201ENSMUST00000082758 141 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Gm24977-201ENSMUST00000083106 163 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Gm22972-201ENSMUST00000083297 131 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.56□□□□□ -2.16
Trbv17A0A140T8P8 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Gm22085-201ENSMUST00000158344 110 ntBASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Gm25707-201ENSMUST00000175120 96 ntBASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Mir3961-201ENSMUST00000198795 59 ntBASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Gm44654-201ENSMUST00000208052 329 ntBASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Gm25813-201ENSMUST00000082748 191 ntBASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Gm24152-201ENSMUST00000082764 163 ntBASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Snora69-201ENSMUST00000083708 131 ntBASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.55□□□□□ -2.16
Trbv17A0A140T8P8 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Gm23015-201ENSMUST00000104145 128 ntBASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Gm11854-201ENSMUST00000117839 446 ntBASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Gm12941-201ENSMUST00000117934 220 ntBASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Gm12417-201ENSMUST00000119153 403 ntBASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Gm12785-201ENSMUST00000122052 172 ntBASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Gm22843-201ENSMUST00000157710 134 ntBASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Gm24390-201ENSMUST00000179578 62 ntBASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Gm22263-201ENSMUST00000180060 104 ntBASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Gm26200-201ENSMUST00000180273 79 ntBASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Gm38041-201ENSMUST00000194445 661 ntBASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Gm45344-201ENSMUST00000211610 341 ntBASIC1.54□□□□□ -2.16
Trbv17A0A140T8P8 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm26342-201ENSMUST00000104557 129 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm11862-201ENSMUST00000119678 659 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm13992-201ENSMUST00000120558 156 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm14980-201ENSMUST00000121247 736 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm14678-201ENSMUST00000121396 482 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm25805-201ENSMUST00000122788 108 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm22221-201ENSMUST00000157362 103 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Mir1936-201ENSMUST00000158699 93 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm16584-201ENSMUST00000159267 189 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Mir3103-201ENSMUST00000175474 67 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm5900-201ENSMUST00000179862 375 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm27271-201ENSMUST00000183509 170 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Mir7016-201ENSMUST00000184308 72 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Snord42a-201ENSMUST00000082606 65 ntBASIC1.53□□□□□ -2.16
Trbv17A0A140T8P8 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.53□□□□□ -2.17
Trbv17A0A140T8P8 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.53□□□□□ -2.17
Trbv17A0A140T8P8 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Trbv17A0A140T8P8 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Trbv17A0A140T8P8 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.52□□□□□ -2.17
Trbv17A0A140T8P8 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Trbv17A0A140T8P8 Gm24770-201ENSMUST00000158505 92 ntBASIC1.52□□□□□ -2.17
Trbv17A0A140T8P8 Gm23548-201ENSMUST00000158963 106 ntBASIC1.52□□□□□ -2.17
Trbv17A0A140T8P8 Gm17067-202ENSMUST00000180131 123 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms