Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm5010-201ENSMUST00000213131 260 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm24615-201ENSMUST00000083268 113 ntBASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Trav9-4A0A0B4J1K2 Mir374b-201ENSMUST00000102314 95 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm15266-201ENSMUST00000119635 255 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm23672-201ENSMUST00000157471 107 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm24960-201ENSMUST00000157923 90 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm22076-201ENSMUST00000158601 84 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm27421-201ENSMUST00000184729 167 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm27545-201ENSMUST00000184755 202 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm44396-201ENSMUST00000199843 114 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Igkv13-82-201ENSMUST00000200308 346 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm19032-201ENSMUST00000208584 592 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Mir33-201ENSMUST00000083531 69 ntBASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm22193-201ENSMUST00000116868 76 ntBASIC0.29□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm11792-201ENSMUST00000120640 168 ntBASIC0.29□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm11849-201ENSMUST00000121293 261 ntBASIC0.29□□□□□ -2.36
Trav9-4A0A0B4J1K2 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC0.29□□□□□ -2.36
Trav9-4A0A0B4J1K2 Mir6905-201ENSMUST00000184228 70 ntBASIC0.29□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm10193-201ENSMUST00000188288 231 ntBASIC0.29□□□□□ -2.36
Trav9-4A0A0B4J1K2 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm44548-201ENSMUST00000208929 192 ntBASIC0.29□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm24311-201ENSMUST00000082570 104 ntBASIC0.29□□□□□ -2.36
Trav9-4A0A0B4J1K2 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm21673-201ENSMUST00000186640 436 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm29661-201ENSMUST00000186781 315 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm29308-201ENSMUST00000188863 315 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm21135-201ENSMUST00000189023 436 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 Trbv24-201ENSMUST00000194614 347 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm44358-201ENSMUST00000196301 98 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm42855-201ENSMUST00000197388 253 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 AC157654.1-201ENSMUST00000224130 820 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm25799-201ENSMUST00000082643 107 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm23969-201ENSMUST00000083324 74 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm10780-201ENSMUST00000099459 285 ntBASIC0.28□□□□□ -2.36
Trav9-4A0A0B4J1K2 Gm23203-201ENSMUST00000104374 107 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm25269-201ENSMUST00000122601 104 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm23120-201ENSMUST00000157654 287 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm22339-201ENSMUST00000157718 62 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm26914-201ENSMUST00000182262 223 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm28435-201ENSMUST00000185496 108 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm44449-201ENSMUST00000203610 153 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm40810-201ENSMUST00000219149 253 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 AC192334.2-201ENSMUST00000223087 1091 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm23453-201ENSMUST00000083326 106 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Mir10a-201ENSMUST00000083585 110 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Mir344-201ENSMUST00000083634 95 ntBASIC0.27□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm25088-201ENSMUST00000101803 79 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm26377-201ENSMUST00000102184 108 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm22759-201ENSMUST00000102276 96 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm23744-201ENSMUST00000104231 149 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm6568-201ENSMUST00000122274 697 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm26484-201ENSMUST00000158018 106 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm16546-201ENSMUST00000159442 355 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm24168-201ENSMUST00000178825 107 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm22263-201ENSMUST00000180060 104 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm5116-201ENSMUST00000187732 463 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm29627-201ENSMUST00000187984 463 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm37869-201ENSMUST00000193385 595 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm18213-201ENSMUST00000207850 178 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm7495-201ENSMUST00000215099 426 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.26□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC0.25□□□□□ -2.37
Trav9-4A0A0B4J1K2 Mir467h-201ENSMUST00000116759 121 ntBASIC0.25□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm26303-201ENSMUST00000116845 119 ntBASIC0.25□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm20543-201ENSMUST00000174200 726 ntBASIC0.25□□□□□ -2.37
Trav9-4A0A0B4J1K2 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.25□□□□□ -2.37
Trav9-4A0A0B4J1K2 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.25□□□□□ -2.37
Trav9-4A0A0B4J1K2 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms