Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Mir101a-201ENSMUST00000083517 83 ntBASIC0.11□□□□□ -2.39
Trav3-4A0A075B654 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm25088-201ENSMUST00000101803 79 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm25313-201ENSMUST00000101817 116 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm23744-201ENSMUST00000104231 149 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm15529-201ENSMUST00000121833 994 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm23605-201ENSMUST00000157255 127 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm23387-201ENSMUST00000158586 107 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm25162-201ENSMUST00000158906 159 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm25874-201ENSMUST00000178030 79 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm23287-201ENSMUST00000179427 116 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm23143-201ENSMUST00000180137 116 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Mir7059-201ENSMUST00000184825 59 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm37709-201ENSMUST00000195074 600 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 AC153646.1-201ENSMUST00000223229 1279 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 AC168880.1-201ENSMUST00000225113 707 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 AC163295.1-201ENSMUST00000227840 314 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm24871-201ENSMUST00000083099 116 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm22577-201ENSMUST00000083731 109 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Rnu5g-201ENSMUST00000093721 116 ntBASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.1□□□□□ -2.39
Trav3-4A0A075B654 Gm11859-201ENSMUST00000118099 455 ntBASIC0.09□□□□□ -2.4
Trav3-4A0A075B654 Gm13967-201ENSMUST00000120404 380 ntBASIC0.09□□□□□ -2.4
Trav3-4A0A075B654 Gm22668-201ENSMUST00000158716 260 ntBASIC0.09□□□□□ -2.4
Trav3-4A0A075B654 Gm27475-201ENSMUST00000183420 61 ntBASIC0.09□□□□□ -2.4
Trav3-4A0A075B654 Gm27898-201ENSMUST00000183987 80 ntBASIC0.09□□□□□ -2.4
Trav3-4A0A075B654 Mir7065-201ENSMUST00000185110 61 ntBASIC0.09□□□□□ -2.4
Trav3-4A0A075B654 Gm28921-201ENSMUST00000190219 378 ntBASIC0.09□□□□□ -2.4
Trav3-4A0A075B654 Gm44011-201ENSMUST00000203336 394 ntBASIC0.09□□□□□ -2.4
Trav3-4A0A075B654 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.09□□□□□ -2.4
Trav3-4A0A075B654 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.09□□□□□ -2.4
Trav3-4A0A075B654 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.09□□□□□ -2.4
Trav3-4A0A075B654 Gm25636-201ENSMUST00000082666 133 ntBASIC0.09□□□□□ -2.4
Trav3-4A0A075B654 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.08□□□□□ -2.4
Trav3-4A0A075B654 Gm26339-201ENSMUST00000102368 99 ntBASIC0.08□□□□□ -2.4
Trav3-4A0A075B654 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
Trav3-4A0A075B654 Gm26435-201ENSMUST00000179026 107 ntBASIC0.08□□□□□ -2.4
Trav3-4A0A075B654 Gm5116-201ENSMUST00000187732 463 ntBASIC0.08□□□□□ -2.4
Trav3-4A0A075B654 Gm29627-201ENSMUST00000187984 463 ntBASIC0.08□□□□□ -2.4
Trav3-4A0A075B654 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC0.08□□□□□ -2.4
Trav3-4A0A075B654 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
Trav3-4A0A075B654 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.08□□□□□ -2.4
Trav3-4A0A075B654 Gm22817-201ENSMUST00000157448 356 ntBASIC0.07□□□□□ -2.4
Trav3-4A0A075B654 Gm7925-201ENSMUST00000166690 401 ntBASIC0.07□□□□□ -2.4
Trav3-4A0A075B654 Gm24510-201ENSMUST00000174965 94 ntBASIC0.07□□□□□ -2.4
Trav3-4A0A075B654 Gm24168-201ENSMUST00000178825 107 ntBASIC0.07□□□□□ -2.4
Trav3-4A0A075B654 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
Trav3-4A0A075B654 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.07□□□□□ -2.4
Trav3-4A0A075B654 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.07□□□□□ -2.4
Trav3-4A0A075B654 Gm43911-201ENSMUST00000203097 76 ntBASIC0.07□□□□□ -2.4
Trav3-4A0A075B654 Gm44754-201ENSMUST00000208155 400 ntBASIC0.07□□□□□ -2.4
Trav3-4A0A075B654 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.07□□□□□ -2.4
Trav3-4A0A075B654 Gm46993-201ENSMUST00000220708 259 ntBASIC0.07□□□□□ -2.4
Trav3-4A0A075B654 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.07□□□□□ -2.4
Trav3-4A0A075B654 Gm5899-201ENSMUST00000071770 270 ntBASIC0.07□□□□□ -2.4
Trav3-4A0A075B654 Gm24833-201ENSMUST00000116775 120 ntBASIC0.06□□□□□ -2.4
Trav3-4A0A075B654 Gm22664-201ENSMUST00000158719 105 ntBASIC0.06□□□□□ -2.4
Trav3-4A0A075B654 Mir3079-201ENSMUST00000175428 90 ntBASIC0.06□□□□□ -2.4
Trav3-4A0A075B654 Gm22290-201ENSMUST00000177655 107 ntBASIC0.06□□□□□ -2.4
Trav3-4A0A075B654 Gm22583-201ENSMUST00000178031 107 ntBASIC0.06□□□□□ -2.4
Trav3-4A0A075B654 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.06□□□□□ -2.4
Trav3-4A0A075B654 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.06□□□□□ -2.4
Trav3-4A0A075B654 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Trav3-4A0A075B654 Gm24258-201ENSMUST00000083739 133 ntBASIC0.06□□□□□ -2.4
Trav3-4A0A075B654 Gm24261-201ENSMUST00000083744 104 ntBASIC0.06□□□□□ -2.4
Trav3-4A0A075B654 Mir452-201ENSMUST00000093629 85 ntBASIC0.06□□□□□ -2.4
Trav3-4A0A075B654 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.06□□□□□ -2.4
Trav3-4A0A075B654 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.06□□□□□ -2.4
Trav3-4A0A075B654 Gm16053-201ENSMUST00000120511 188 ntBASIC0.05□□□□□ -2.4
Trav3-4A0A075B654 Gm14846-201ENSMUST00000121868 216 ntBASIC0.05□□□□□ -2.4
Trav3-4A0A075B654 Gm11334-201ENSMUST00000121969 156 ntBASIC0.05□□□□□ -2.4
Trav3-4A0A075B654 Gm23967-201ENSMUST00000175062 78 ntBASIC0.05□□□□□ -2.4
Trav3-4A0A075B654 Gm9022-202ENSMUST00000183285 483 ntBASIC0.05□□□□□ -2.4
Trav3-4A0A075B654 Mir6917-201ENSMUST00000184111 61 ntBASIC0.05□□□□□ -2.4
Trav3-4A0A075B654 Gm10193-201ENSMUST00000188288 231 ntBASIC0.05□□□□□ -2.4
Trav3-4A0A075B654 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.05□□□□□ -2.4
Trav3-4A0A075B654 Gm44921-201ENSMUST00000205290 301 ntBASIC0.05□□□□□ -2.4
Trav3-4A0A075B654 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.05□□□□□ -2.4
Trav3-4A0A075B654 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.05□□□□□ -2.4
Trav3-4A0A075B654 AC121114.1-201ENSMUST00000228522 570 ntBASIC0.05□□□□□ -2.4
Trav3-4A0A075B654 Gm25938-201ENSMUST00000104139 166 ntBASIC0.04□□□□□ -2.4
Trav3-4A0A075B654 Gm26249-201ENSMUST00000116708 118 ntBASIC0.04□□□□□ -2.4
Trav3-4A0A075B654 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC0.04□□□□□ -2.4
Trav3-4A0A075B654 Gm14946-201ENSMUST00000119859 296 ntBASIC0.04□□□□□ -2.4
Trav3-4A0A075B654 Gm12837-201ENSMUST00000120131 373 ntBASIC0.04□□□□□ -2.4
Trav3-4A0A075B654 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.04□□□□□ -2.4
Trav3-4A0A075B654 Gm23267-201ENSMUST00000178490 132 ntBASIC0.04□□□□□ -2.4
Trav3-4A0A075B654 Gm19901-201ENSMUST00000192191 495 ntBASIC0.04□□□□□ -2.4
Trav3-4A0A075B654 Gm33654-201ENSMUST00000221704 215 ntBASIC0.04□□□□□ -2.4
Trav3-4A0A075B654 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.04□□□□□ -2.4
Trav3-4A0A075B654 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Trav3-4A0A075B654 Gm14599-201ENSMUST00000120469 474 ntBASIC0.03□□□□□ -2.4
Trav3-4A0A075B654 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 152.1 ms