Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Trav9-1A0A075B601 Gm29490-201ENSMUST00000190923 342 ntBASIC0.32□□□□□ -2.36
Trav9-1A0A075B601 Gm38149-201ENSMUST00000191943 339 ntBASIC0.32□□□□□ -2.36
Trav9-1A0A075B601 Gm44465-201ENSMUST00000199536 114 ntBASIC0.32□□□□□ -2.36
Trav9-1A0A075B601 Gm44254-201ENSMUST00000204184 322 ntBASIC0.32□□□□□ -2.36
Trav9-1A0A075B601 Gm5010-201ENSMUST00000213131 260 ntBASIC0.32□□□□□ -2.36
Trav9-1A0A075B601 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.32□□□□□ -2.36
Trav9-1A0A075B601 Snord33-201ENSMUST00000083694 84 ntBASIC0.32□□□□□ -2.36
Trav9-1A0A075B601 Gm24258-201ENSMUST00000083739 133 ntBASIC0.32□□□□□ -2.36
Trav9-1A0A075B601 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.32□□□□□ -2.36
Trav9-1A0A075B601 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Trav9-1A0A075B601 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Trav9-1A0A075B601 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 Gm23744-201ENSMUST00000104231 149 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 Gm22193-201ENSMUST00000116868 76 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 Gm12102-201ENSMUST00000118251 604 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 Gm22263-201ENSMUST00000180060 104 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 Gm27545-201ENSMUST00000184755 202 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 Gm21673-201ENSMUST00000186640 436 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 Gm21135-201ENSMUST00000189023 436 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 Gm7495-201ENSMUST00000215099 426 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 AC153957.1-201ENSMUST00000215235 229 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 Gm46997-201ENSMUST00000222108 217 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.31□□□□□ -2.36
Trav9-1A0A075B601 Gm22149-201ENSMUST00000104442 136 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Gm23672-201ENSMUST00000157471 107 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Gm20543-201ENSMUST00000174200 726 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Gm24168-201ENSMUST00000178825 107 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Gm5116-201ENSMUST00000187732 463 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Gm29627-201ENSMUST00000187984 463 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Gm42855-201ENSMUST00000197388 253 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Trdv3-201ENSMUST00000198551 309 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Gm40810-201ENSMUST00000219149 253 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 AC192334.2-201ENSMUST00000223087 1091 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Gm23453-201ENSMUST00000083326 106 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Mir10a-201ENSMUST00000083585 110 ntBASIC0.3□□□□□ -2.36
Trav9-1A0A075B601 Gm24271-201ENSMUST00000102327 111 ntBASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Gm25269-201ENSMUST00000122601 104 ntBASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Gm26914-201ENSMUST00000182262 223 ntBASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Gm37713-201ENSMUST00000191746 198 ntBASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Gm44358-201ENSMUST00000196301 98 ntBASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Gm44396-201ENSMUST00000199843 114 ntBASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Gm29848-201ENSMUST00000203107 295 ntBASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Gm44449-201ENSMUST00000203610 153 ntBASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 AL450317.1-201ENSMUST00000213941 291 ntBASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Gm24311-201ENSMUST00000082570 104 ntBASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Gm23969-201ENSMUST00000083324 74 ntBASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Trav9-1A0A075B601 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 Gm14599-201ENSMUST00000120469 474 ntBASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 Gm24481-201ENSMUST00000157210 102 ntBASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 Gm25162-201ENSMUST00000158906 159 ntBASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 Gm22290-201ENSMUST00000177655 107 ntBASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 Gm22583-201ENSMUST00000178031 107 ntBASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 Gm20874-201ENSMUST00000178356 663 ntBASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 Gm34073-201ENSMUST00000195736 212 ntBASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 Gm31520-201ENSMUST00000203048 733 ntBASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 AC157654.1-201ENSMUST00000224130 820 ntBASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.28□□□□□ -2.36
Trav9-1A0A075B601 Gm26377-201ENSMUST00000102184 108 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Mir467h-201ENSMUST00000116759 121 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Gm23991-201ENSMUST00000117033 93 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Gm13577-201ENSMUST00000121365 205 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Gm22796-201ENSMUST00000157234 106 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Gm26484-201ENSMUST00000158018 106 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Gm22668-201ENSMUST00000158716 260 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Gm24678-201ENSMUST00000158756 104 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Gm25956-201ENSMUST00000175115 217 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Mir6394-201ENSMUST00000184738 99 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Gm28435-201ENSMUST00000185496 108 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Gm44976-201ENSMUST00000205543 261 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Gm18213-201ENSMUST00000207850 178 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Trav9-1A0A075B601 Gm22759-201ENSMUST00000102276 96 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm26339-201ENSMUST00000102368 99 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm26249-201ENSMUST00000116708 118 ntBASIC0.26□□□□□ -2.37
Trav9-1A0A075B601 Gm14898-201ENSMUST00000120202 645 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 379.5 ms