Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm12550-201ENSMUST00000118478 329 ntBASIC1.88□□□□□ -2.11
H2afb2S4R1M3 Gm12304-201ENSMUST00000120312 385 ntBASIC1.88□□□□□ -2.11
H2afb2S4R1M3 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.88□□□□□ -2.11
H2afb2S4R1M3 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.88□□□□□ -2.11
H2afb2S4R1M3 Mir6917-201ENSMUST00000184111 61 ntBASIC1.88□□□□□ -2.11
H2afb2S4R1M3 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.88□□□□□ -2.11
H2afb2S4R1M3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.88□□□□□ -2.11
H2afb2S4R1M3 Gm23731-201ENSMUST00000083749 107 ntBASIC1.88□□□□□ -2.11
H2afb2S4R1M3 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Gm25090-201ENSMUST00000104000 132 ntBASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Gm12837-201ENSMUST00000120131 373 ntBASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Gm24005-201ENSMUST00000158459 296 ntBASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Gm25020-201ENSMUST00000178071 107 ntBASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Gm25284-201ENSMUST00000180345 141 ntBASIC1.87□□□□□ -2.11
H2afb2S4R1M3 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Gm28408-201ENSMUST00000191557 463 ntBASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Mir378a-201ENSMUST00000198300 66 ntBASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Gm43406-201ENSMUST00000200356 334 ntBASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
H2afb2S4R1M3 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
H2afb2S4R1M3 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Gm9059-201ENSMUST00000118319 183 ntBASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Gm23214-201ENSMUST00000122716 157 ntBASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Gm25625-201ENSMUST00000157221 96 ntBASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Gm24726-201ENSMUST00000158232 121 ntBASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Gm24770-201ENSMUST00000158505 92 ntBASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Gm22242-201ENSMUST00000175224 118 ntBASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Mir5118-201ENSMUST00000175551 67 ntBASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Gm27544-201ENSMUST00000185069 155 ntBASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Mir7661-201ENSMUST00000197023 61 ntBASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Gm43583-201ENSMUST00000199235 303 ntBASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Gm44960-201ENSMUST00000207403 141 ntBASIC1.86□□□□□ -2.11
H2afb2S4R1M3 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Gm23412-201ENSMUST00000083017 107 ntBASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Gm23851-201ENSMUST00000083831 103 ntBASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
H2afb2S4R1M3 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm11322-201ENSMUST00000118095 435 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm5396-201ENSMUST00000121222 532 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm22113-201ENSMUST00000158343 104 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm25051-201ENSMUST00000158602 249 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm22527-201ENSMUST00000158816 106 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm24618-201ENSMUST00000177718 94 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm22114-201ENSMUST00000177756 107 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm23953-201ENSMUST00000178214 94 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm26332-201ENSMUST00000179813 94 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm22863-201ENSMUST00000180265 94 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm28016-201ENSMUST00000184594 196 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm44256-201ENSMUST00000203304 335 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.85□□□□□ -2.11
H2afb2S4R1M3 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm45207-201ENSMUST00000207469 145 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm25896-201ENSMUST00000083713 136 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm26107-201ENSMUST00000083972 107 ntBASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.85□□□□□ -2.11
H2afb2S4R1M3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
H2afb2S4R1M3 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.84□□□□□ -2.11
H2afb2S4R1M3 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
H2afb2S4R1M3 Gm14761-201ENSMUST00000121363 262 ntBASIC1.84□□□□□ -2.11
H2afb2S4R1M3 Trav20-201ENSMUST00000142754 347 ntBASIC1.84□□□□□ -2.11
H2afb2S4R1M3 Mir5624-201ENSMUST00000176635 61 ntBASIC1.84□□□□□ -2.11
H2afb2S4R1M3 Gm24304-201ENSMUST00000177635 107 ntBASIC1.84□□□□□ -2.11
H2afb2S4R1M3 Gm2829-201ENSMUST00000213121 499 ntBASIC1.84□□□□□ -2.11
H2afb2S4R1M3 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.11
H2afb2S4R1M3 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.84□□□□□ -2.11
H2afb2S4R1M3 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.84□□□□□ -2.11
H2afb2S4R1M3 Gm23041-201ENSMUST00000083868 106 ntBASIC1.84□□□□□ -2.11
H2afb2S4R1M3 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
H2afb2S4R1M3 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
H2afb2S4R1M3 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Gm22316-201ENSMUST00000158012 216 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Gm23262-201ENSMUST00000158323 168 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Gm23548-201ENSMUST00000158963 106 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Gm25707-201ENSMUST00000175120 96 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Gm24656-201ENSMUST00000177548 132 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Gm25121-201ENSMUST00000179846 79 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Gm28257-201ENSMUST00000185244 463 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Gm28995-201ENSMUST00000186625 261 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Mir7021-201ENSMUST00000197026 63 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Gm44024-201ENSMUST00000203008 476 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Gm44010-201ENSMUST00000204432 331 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.83□□□□□ -2.12
H2afb2S4R1M3 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.83□□□□□ -2.12
H2afb2S4R1M3 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 165.4 ms