Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm26447-201ENSMUST00000082448 129 ntBASIC2□□□□□ -2.09
H2afb1S4R1E0 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm22494-201ENSMUST00000104495 128 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm14782-201ENSMUST00000120151 195 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm24629-201ENSMUST00000122762 89 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm24348-201ENSMUST00000158710 130 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm25450-201ENSMUST00000179144 107 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm27249-201ENSMUST00000185049 328 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm29512-201ENSMUST00000185544 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm28110-201ENSMUST00000185782 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm29057-201ENSMUST00000186468 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm29661-201ENSMUST00000186781 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm28737-201ENSMUST00000186808 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm29118-201ENSMUST00000186908 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm28433-201ENSMUST00000187085 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm28759-201ENSMUST00000187621 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm28831-201ENSMUST00000187739 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm28200-201ENSMUST00000187778 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm28752-201ENSMUST00000188340 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm29378-201ENSMUST00000188723 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm28569-201ENSMUST00000188748 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm28120-201ENSMUST00000188812 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm28369-201ENSMUST00000188993 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm29037-201ENSMUST00000189092 313 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm28909-201ENSMUST00000189406 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm28861-201ENSMUST00000189681 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm29180-201ENSMUST00000190003 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm29575-201ENSMUST00000190597 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm29469-201ENSMUST00000191448 315 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm37162-201ENSMUST00000191708 551 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm42594-201ENSMUST00000199511 246 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm45005-201ENSMUST00000206640 157 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.99□□□□□ -2.09
H2afb1S4R1E0 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
H2afb1S4R1E0 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
H2afb1S4R1E0 Gm26249-201ENSMUST00000116708 118 ntBASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Mir1b-201ENSMUST00000117012 122 ntBASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Gm12956-201ENSMUST00000122184 414 ntBASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Gm22598-201ENSMUST00000157600 127 ntBASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Gm24225-201ENSMUST00000158825 98 ntBASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Gm17100-201ENSMUST00000168963 272 ntBASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Gm25397-201ENSMUST00000176951 92 ntBASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Mir7047-201ENSMUST00000184595 64 ntBASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Gm43250-201ENSMUST00000196536 273 ntBASIC1.98□□□□□ -2.09
H2afb1S4R1E0 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.98□□□□□ -2.09
H2afb1S4R1E0 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
H2afb1S4R1E0 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Gm24282-201ENSMUST00000104232 66 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Gm23803-201ENSMUST00000104610 132 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Mir872-201ENSMUST00000104728 81 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Gm15281-201ENSMUST00000125181 351 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Gm28288-201ENSMUST00000191019 214 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Gm44024-201ENSMUST00000203008 476 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Gm23625-201ENSMUST00000082457 100 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Gm23055-201ENSMUST00000082805 94 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Snora69-201ENSMUST00000083708 131 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Gm45558-201ENSMUST00000209384 1895 ntBASIC1.97□□□□□ -2.09
H2afb1S4R1E0 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
H2afb1S4R1E0 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
H2afb1S4R1E0 Gm14001-201ENSMUST00000118847 247 ntBASIC1.96□□□□□ -2.1
H2afb1S4R1E0 Gm13432-201ENSMUST00000118861 241 ntBASIC1.96□□□□□ -2.1
H2afb1S4R1E0 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.96□□□□□ -2.1
H2afb1S4R1E0 Gm23589-201ENSMUST00000157660 105 ntBASIC1.96□□□□□ -2.1
H2afb1S4R1E0 Gm25956-201ENSMUST00000175115 217 ntBASIC1.96□□□□□ -2.1
H2afb1S4R1E0 Mir3075-201ENSMUST00000175340 85 ntBASIC1.96□□□□□ -2.1
H2afb1S4R1E0 Gm18357-201ENSMUST00000188184 580 ntBASIC1.96□□□□□ -2.1
H2afb1S4R1E0 Gm28848-201ENSMUST00000189984 168 ntBASIC1.96□□□□□ -2.1
H2afb1S4R1E0 Gm44473-201ENSMUST00000204039 152 ntBASIC1.96□□□□□ -2.1
H2afb1S4R1E0 AC154527.5-201ENSMUST00000224448 496 ntBASIC1.96□□□□□ -2.1
H2afb1S4R1E0 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.96□□□□□ -2.1
H2afb1S4R1E0 AC125374.3-201ENSMUST00000214983 2810 ntBASIC1.96□□□□□ -2.1
H2afb1S4R1E0 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.96□□□□□ -2.1
H2afb1S4R1E0 Gm23175-201ENSMUST00000104371 132 ntBASIC1.95□□□□□ -2.1
H2afb1S4R1E0 Gm25315-201ENSMUST00000116823 121 ntBASIC1.95□□□□□ -2.1
H2afb1S4R1E0 Gm14803-201ENSMUST00000117163 361 ntBASIC1.95□□□□□ -2.1
H2afb1S4R1E0 Gm14837-201ENSMUST00000119688 206 ntBASIC1.95□□□□□ -2.1
H2afb1S4R1E0 Gm6829-201ENSMUST00000119858 360 ntBASIC1.95□□□□□ -2.1
H2afb1S4R1E0 Gm13729-201ENSMUST00000120328 406 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms