Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm18113-201ENSMUST00000220630 303 ntBASIC1.43□□□□□ -2.18
Cldn9Q9Z0S7 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.43□□□□□ -2.18
Cldn9Q9Z0S7 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Cldn9Q9Z0S7 Gm26457-201ENSMUST00000082678 78 ntBASIC1.43□□□□□ -2.18
Cldn9Q9Z0S7 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Cldn9Q9Z0S7 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm26082-201ENSMUST00000104070 127 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm25832-201ENSMUST00000104140 130 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm22963-201ENSMUST00000157960 91 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm25044-201ENSMUST00000158603 104 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm25831-201ENSMUST00000158924 163 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm20438-201ENSMUST00000174441 329 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm25035-201ENSMUST00000175414 77 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm27326-201ENSMUST00000183504 95 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Mir7683-201ENSMUST00000183842 61 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm27957-201ENSMUST00000184054 127 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm27755-201ENSMUST00000184623 132 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm29167-201ENSMUST00000190024 377 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm18546-201ENSMUST00000197245 676 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm44655-201ENSMUST00000207768 423 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm46993-201ENSMUST00000220708 259 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm24623-201ENSMUST00000082616 194 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.42□□□□□ -2.18
Cldn9Q9Z0S7 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm23718-201ENSMUST00000157350 307 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm23558-201ENSMUST00000157823 80 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm22075-201ENSMUST00000158599 192 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm23090-201ENSMUST00000177331 78 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm25730-201ENSMUST00000178753 165 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm27919-201ENSMUST00000185163 107 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm36891-201ENSMUST00000191995 655 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm43245-201ENSMUST00000197603 468 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm23100-201ENSMUST00000083455 141 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm25896-201ENSMUST00000083713 136 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm23347-201ENSMUST00000083823 82 ntBASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Cldn9Q9Z0S7 Gm22834-201ENSMUST00000102021 79 ntBASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Mir223-201ENSMUST00000102112 110 ntBASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Gm24282-201ENSMUST00000104232 66 ntBASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Gm12512-201ENSMUST00000119620 217 ntBASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Gm6025-201ENSMUST00000121517 201 ntBASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Gm11358-201ENSMUST00000122310 373 ntBASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Gm23221-201ENSMUST00000158118 93 ntBASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Mir6240-201ENSMUST00000184281 117 ntBASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Gm29005-201ENSMUST00000186773 320 ntBASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Mir1291-201ENSMUST00000199842 117 ntBASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Gm43911-201ENSMUST00000203097 76 ntBASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Snora34-201ENSMUST00000083402 138 ntBASIC1.4□□□□□ -2.19
Cldn9Q9Z0S7 Gm25170-201ENSMUST00000104191 129 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm12351-201ENSMUST00000118727 292 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm25052-201ENSMUST00000122661 158 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm24895-201ENSMUST00000122742 74 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm24262-201ENSMUST00000157431 144 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm22082-201ENSMUST00000157587 161 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm26393-201ENSMUST00000157625 129 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm23557-201ENSMUST00000157820 138 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm22841-201ENSMUST00000158443 62 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm17113-201ENSMUST00000170118 171 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm27265-201ENSMUST00000183559 77 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Mir6388-201ENSMUST00000184417 75 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm33866-201ENSMUST00000196911 289 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm45315-201ENSMUST00000209283 333 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm19441-201ENSMUST00000221545 330 ntBASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Cldn9Q9Z0S7 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.38□□□□□ -2.19
Cldn9Q9Z0S7 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Cldn9Q9Z0S7 Gm25274-201ENSMUST00000104296 135 ntBASIC1.38□□□□□ -2.19
Cldn9Q9Z0S7 Gm25496-201ENSMUST00000104430 120 ntBASIC1.38□□□□□ -2.19
Cldn9Q9Z0S7 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.38□□□□□ -2.19
Cldn9Q9Z0S7 Gm23120-201ENSMUST00000157654 287 ntBASIC1.38□□□□□ -2.19
Cldn9Q9Z0S7 Gm24438-201ENSMUST00000157893 115 ntBASIC1.38□□□□□ -2.19
Cldn9Q9Z0S7 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.38□□□□□ -2.19
Cldn9Q9Z0S7 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.38□□□□□ -2.19
Cldn9Q9Z0S7 Gm5034-201ENSMUST00000199115 634 ntBASIC1.38□□□□□ -2.19
Cldn9Q9Z0S7 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 184.9 ms