Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Gm15177-201ENSMUST00000120491 577 ntBASIC0.06□□□□□ -2.4
Six6Q9QZ28 Gm2962-201ENSMUST00000159266 336 ntBASIC0.06□□□□□ -2.4
Six6Q9QZ28 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.06□□□□□ -2.4
Six6Q9QZ28 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Six6Q9QZ28 Gm27475-201ENSMUST00000183420 61 ntBASIC0.06□□□□□ -2.4
Six6Q9QZ28 Gm27676-201ENSMUST00000183669 61 ntBASIC0.06□□□□□ -2.4
Six6Q9QZ28 Mir7065-201ENSMUST00000185110 61 ntBASIC0.06□□□□□ -2.4
Six6Q9QZ28 Mir7118-201ENSMUST00000197760 61 ntBASIC0.06□□□□□ -2.4
Six6Q9QZ28 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.06□□□□□ -2.4
Six6Q9QZ28 Mir421-201ENSMUST00000083575 76 ntBASIC0.06□□□□□ -2.4
Six6Q9QZ28 Gm23733-201ENSMUST00000083750 106 ntBASIC0.06□□□□□ -2.4
Six6Q9QZ28 Gm23058-201ENSMUST00000093703 107 ntBASIC0.06□□□□□ -2.4
Six6Q9QZ28 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Six6Q9QZ28 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.05□□□□□ -2.4
Six6Q9QZ28 Mir710-201ENSMUST00000102088 110 ntBASIC0.05□□□□□ -2.4
Six6Q9QZ28 Gm14269-201ENSMUST00000120455 306 ntBASIC0.05□□□□□ -2.4
Six6Q9QZ28 Gm13153-201ENSMUST00000120969 637 ntBASIC0.05□□□□□ -2.4
Six6Q9QZ28 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.05□□□□□ -2.4
Six6Q9QZ28 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.05□□□□□ -2.4
Six6Q9QZ28 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.05□□□□□ -2.4
Six6Q9QZ28 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.05□□□□□ -2.4
Six6Q9QZ28 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.05□□□□□ -2.4
Six6Q9QZ28 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 Gm12881-201ENSMUST00000121191 203 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 Gm23331-201ENSMUST00000157423 108 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 Gm23120-201ENSMUST00000157654 287 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 Gm23340-201ENSMUST00000158955 123 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 Gm22263-201ENSMUST00000180060 104 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 Gm27715-201ENSMUST00000184714 260 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 Gm29216-201ENSMUST00000187117 492 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 Gm42855-201ENSMUST00000197388 253 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 Gm43406-201ENSMUST00000200356 334 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 Gm44988-201ENSMUST00000203835 1161 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.04□□□□□ -2.4
Six6Q9QZ28 Gm22306-201ENSMUST00000082692 107 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 Gm24610-201ENSMUST00000083270 109 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0.04□□□□□ -2.4
Six6Q9QZ28 Gm24833-201ENSMUST00000116775 120 ntBASIC0.03□□□□□ -2.4
Six6Q9QZ28 Gm11849-201ENSMUST00000121293 261 ntBASIC0.03□□□□□ -2.4
Six6Q9QZ28 Gm16359-201ENSMUST00000124511 289 ntBASIC0.03□□□□□ -2.4
Six6Q9QZ28 Gm22038-201ENSMUST00000157277 242 ntBASIC0.03□□□□□ -2.4
Six6Q9QZ28 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.03□□□□□ -2.4
Six6Q9QZ28 Mir3964-201ENSMUST00000174898 74 ntBASIC0.03□□□□□ -2.4
Six6Q9QZ28 Gm25194-201ENSMUST00000177987 79 ntBASIC0.03□□□□□ -2.4
Six6Q9QZ28 Gm23714-201ENSMUST00000179259 105 ntBASIC0.03□□□□□ -2.4
Six6Q9QZ28 Gm19855-201ENSMUST00000210145 249 ntBASIC0.03□□□□□ -2.4
Six6Q9QZ28 AC159885.1-201ENSMUST00000222221 199 ntBASIC0.03□□□□□ -2.4
Six6Q9QZ28 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.03□□□□□ -2.4
Six6Q9QZ28 AC133654.1-201ENSMUST00000228411 672 ntBASIC0.03□□□□□ -2.4
Six6Q9QZ28 AC121114.1-201ENSMUST00000228522 570 ntBASIC0.03□□□□□ -2.4
Six6Q9QZ28 Gm24889-201ENSMUST00000104388 132 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 Gm13603-201ENSMUST00000119404 83 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 Gm24836-201ENSMUST00000122609 108 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.02□□□□□ -2.41
Six6Q9QZ28 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC0.02□□□□□ -2.41
Six6Q9QZ28 Gm23435-201ENSMUST00000157183 156 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 Gm22565-201ENSMUST00000175540 69 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 Gm22802-201ENSMUST00000175621 89 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 Gm42958-201ENSMUST00000197595 318 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 Gm43004-201ENSMUST00000201872 703 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.02□□□□□ -2.41
Six6Q9QZ28 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 AC123656.2-201ENSMUST00000226726 227 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 Mir101a-201ENSMUST00000083517 83 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 Gm42736-201ENSMUST00000200723 1353 ntBASIC0.02□□□□□ -2.41
Six6Q9QZ28 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Six6Q9QZ28 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.01□□□□□ -2.41
Six6Q9QZ28 Gm22193-201ENSMUST00000116868 76 ntBASIC0.01□□□□□ -2.41
Six6Q9QZ28 Gm15175-201ENSMUST00000117629 132 ntBASIC0.01□□□□□ -2.41
Six6Q9QZ28 Gm8858-201ENSMUST00000118259 342 ntBASIC0.01□□□□□ -2.41
Six6Q9QZ28 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.01□□□□□ -2.41
Six6Q9QZ28 Gm23761-201ENSMUST00000158347 104 ntBASIC0.01□□□□□ -2.41
Six6Q9QZ28 Gm25491-201ENSMUST00000158733 308 ntBASIC0.01□□□□□ -2.41
Six6Q9QZ28 Gm18396-201ENSMUST00000177095 361 ntBASIC0.01□□□□□ -2.41
Six6Q9QZ28 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Six6Q9QZ28 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC0.01□□□□□ -2.41
Six6Q9QZ28 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC0.01□□□□□ -2.41
Six6Q9QZ28 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
Six6Q9QZ28 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Six6Q9QZ28 Gm25698-201ENSMUST00000082897 107 ntBASIC0.01□□□□□ -2.41
Six6Q9QZ28 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Six6Q9QZ28 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
Six6Q9QZ28 Gm11859-201ENSMUST00000118099 455 ntBASIC0□□□□□ -2.41
Six6Q9QZ28 Gm15102-201ENSMUST00000118740 1502 ntBASIC0□□□□□ -2.41
Six6Q9QZ28 Gm14887-201ENSMUST00000119522 663 ntBASIC0□□□□□ -2.41
Six6Q9QZ28 Gm12837-201ENSMUST00000120131 373 ntBASIC0□□□□□ -2.41
Six6Q9QZ28 Gm24840-201ENSMUST00000122603 147 ntBASIC0□□□□□ -2.41
Six6Q9QZ28 Gm23587-201ENSMUST00000157658 84 ntBASIC0□□□□□ -2.41
Six6Q9QZ28 Gm15914-201ENSMUST00000161922 309 ntBASIC0□□□□□ -2.41
Six6Q9QZ28 Gm25952-201ENSMUST00000175329 74 ntBASIC0□□□□□ -2.41
Six6Q9QZ28 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0□□□□□ -2.41
Six6Q9QZ28 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0□□□□□ -2.41
Six6Q9QZ28 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0□□□□□ -2.41
Six6Q9QZ28 Gm15101-201ENSMUST00000178818 1502 ntBASIC0□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms