Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm13885-201ENSMUST00000117569 187 ntBASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Gm11834-201ENSMUST00000122257 585 ntBASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Gm23120-201ENSMUST00000157654 287 ntBASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Gm25888-201ENSMUST00000157778 302 ntBASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Gm24053-201ENSMUST00000158620 105 ntBASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Gm24487-201ENSMUST00000178017 63 ntBASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Gm43676-201ENSMUST00000197532 540 ntBASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Gm43914-201ENSMUST00000203592 594 ntBASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Gm22062-201ENSMUST00000082563 107 ntBASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Snord42a-201ENSMUST00000082606 65 ntBASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Gm26126-201ENSMUST00000083188 164 ntBASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Mir300-201ENSMUST00000083485 79 ntBASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
Cpsf3Q9QXK7 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Gm24275-201ENSMUST00000116780 146 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Gm13432-201ENSMUST00000118861 241 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Gm24478-201ENSMUST00000157439 158 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Gm22113-201ENSMUST00000158343 104 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Gm22664-201ENSMUST00000158719 105 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Gm16584-201ENSMUST00000159267 189 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Gm25933-201ENSMUST00000178943 108 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Gm26914-201ENSMUST00000182262 223 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Mir6997-201ENSMUST00000184313 71 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Gm28717-201ENSMUST00000189950 315 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Gm28848-201ENSMUST00000189984 168 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Gm7214-201ENSMUST00000222428 272 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 mt-Tr-201ENSMUST00000082412 68 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Cpsf3Q9QXK7 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Gm26249-201ENSMUST00000116708 118 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Gm26255-201ENSMUST00000122492 103 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Gm22843-201ENSMUST00000157710 134 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Gm16038-201ENSMUST00000159317 193 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Gm37162-201ENSMUST00000191708 551 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Gm3724-201ENSMUST00000197957 349 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Gm44960-201ENSMUST00000207403 141 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Snord68-201ENSMUST00000082516 86 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Mir30d-201ENSMUST00000083503 82 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Mir496a-201ENSMUST00000093627 79 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.13□□□□□ -2.07
Cpsf3Q9QXK7 Gm11859-201ENSMUST00000118099 455 ntBASIC2.12□□□□□ -2.07
Cpsf3Q9QXK7 Gm7592-201ENSMUST00000160674 627 ntBASIC2.12□□□□□ -2.07
Cpsf3Q9QXK7 Gm26400-201ENSMUST00000175012 85 ntBASIC2.12□□□□□ -2.07
Cpsf3Q9QXK7 Gm25671-201ENSMUST00000178612 105 ntBASIC2.12□□□□□ -2.07
Cpsf3Q9QXK7 Gm23307-201ENSMUST00000179167 105 ntBASIC2.12□□□□□ -2.07
Cpsf3Q9QXK7 Gm25286-201ENSMUST00000179790 105 ntBASIC2.12□□□□□ -2.07
Cpsf3Q9QXK7 Gm42672-201ENSMUST00000197821 352 ntBASIC2.12□□□□□ -2.07
Cpsf3Q9QXK7 Gm44429-201ENSMUST00000203542 186 ntBASIC2.12□□□□□ -2.07
Cpsf3Q9QXK7 Gm44533-201ENSMUST00000207782 268 ntBASIC2.12□□□□□ -2.07
Cpsf3Q9QXK7 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.12□□□□□ -2.07
Cpsf3Q9QXK7 Gm22685-201ENSMUST00000082848 106 ntBASIC2.12□□□□□ -2.07
Cpsf3Q9QXK7 Mir29c-201ENSMUST00000083614 88 ntBASIC2.12□□□□□ -2.07
Cpsf3Q9QXK7 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.12□□□□□ -2.07
Cpsf3Q9QXK7 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Gm23142-201ENSMUST00000101848 105 ntBASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Gm26240-201ENSMUST00000101893 105 ntBASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Gm13339-201ENSMUST00000120651 510 ntBASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Trav20-201ENSMUST00000142754 347 ntBASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Gm24308-201ENSMUST00000177773 114 ntBASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Gm29005-201ENSMUST00000186773 320 ntBASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 AC158981.3-202ENSMUST00000228906 523 ntBASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Gm25589-201ENSMUST00000082502 166 ntBASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Cpsf3Q9QXK7 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 Mir669o-201ENSMUST00000103898 96 ntBASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 Gm25059-201ENSMUST00000157367 117 ntBASIC2.1□□□□□ -2.07
Cpsf3Q9QXK7 Gm28257-201ENSMUST00000185244 463 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 142.6 ms