Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm29057-201ENSMUST00000186468 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28737-201ENSMUST00000186808 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm29147-201ENSMUST00000186846 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm29118-201ENSMUST00000186908 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28433-201ENSMUST00000187085 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm29227-201ENSMUST00000187139 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28759-201ENSMUST00000187621 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28831-201ENSMUST00000187739 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28200-201ENSMUST00000187778 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm29034-201ENSMUST00000188099 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28752-201ENSMUST00000188340 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm29378-201ENSMUST00000188723 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28569-201ENSMUST00000188748 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28120-201ENSMUST00000188812 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28369-201ENSMUST00000188993 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28537-201ENSMUST00000189026 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28909-201ENSMUST00000189406 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28861-201ENSMUST00000189681 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28717-201ENSMUST00000189950 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm29180-201ENSMUST00000190003 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm29575-201ENSMUST00000190597 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm29631-201ENSMUST00000191065 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm28160-201ENSMUST00000191229 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm29469-201ENSMUST00000191448 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm37658-201ENSMUST00000192672 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm37129-201ENSMUST00000195791 315 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm23370-201ENSMUST00000199545 130 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm44142-201ENSMUST00000203358 311 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm18453-201ENSMUST00000208000 626 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Mir322-201ENSMUST00000083484 95 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.27□□□□□ -2.21
Trem1Q9JKE2 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Trem1Q9JKE2 Gm22834-201ENSMUST00000102021 79 ntBASIC1.26□□□□□ -2.21
Trem1Q9JKE2 Gm26342-201ENSMUST00000104557 129 ntBASIC1.26□□□□□ -2.21
Trem1Q9JKE2 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.26□□□□□ -2.21
Trem1Q9JKE2 Gm24726-201ENSMUST00000158232 121 ntBASIC1.26□□□□□ -2.21
Trem1Q9JKE2 Gm24510-201ENSMUST00000174965 94 ntBASIC1.26□□□□□ -2.21
Trem1Q9JKE2 Mir7091-201ENSMUST00000184075 79 ntBASIC1.26□□□□□ -2.21
Trem1Q9JKE2 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.26□□□□□ -2.21
Trem1Q9JKE2 Gm43723-201ENSMUST00000196886 189 ntBASIC1.26□□□□□ -2.21
Trem1Q9JKE2 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.26□□□□□ -2.21
Trem1Q9JKE2 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.26□□□□□ -2.21
Trem1Q9JKE2 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.26□□□□□ -2.21
Trem1Q9JKE2 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Trem1Q9JKE2 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.25□□□□□ -2.21
Trem1Q9JKE2 BC022960-201ENSMUST00000119987 1815 ntBASIC1.25□□□□□ -2.21
Trem1Q9JKE2 Gm24865-201ENSMUST00000103246 96 ntBASIC1.25□□□□□ -2.21
Trem1Q9JKE2 Gm23109-201ENSMUST00000116867 126 ntBASIC1.25□□□□□ -2.21
Trem1Q9JKE2 Gm23558-201ENSMUST00000157823 80 ntBASIC1.25□□□□□ -2.21
Trem1Q9JKE2 Gm23419-201ENSMUST00000175523 84 ntBASIC1.25□□□□□ -2.21
Trem1Q9JKE2 Gm16399-201ENSMUST00000181423 219 ntBASIC1.25□□□□□ -2.21
Trem1Q9JKE2 Gm28848-201ENSMUST00000189984 168 ntBASIC1.25□□□□□ -2.21
Trem1Q9JKE2 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.25□□□□□ -2.21
Trem1Q9JKE2 Gm25038-201ENSMUST00000082928 130 ntBASIC1.25□□□□□ -2.21
Trem1Q9JKE2 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Mir743b-201ENSMUST00000104751 77 ntBASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Gm24366-201ENSMUST00000175383 86 ntBASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Gm24315-201ENSMUST00000177835 127 ntBASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Gm22129-201ENSMUST00000179034 107 ntBASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Mir6997-201ENSMUST00000184313 71 ntBASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Gm28409-201ENSMUST00000187064 103 ntBASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Gm18296-201ENSMUST00000192475 783 ntBASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Gm18433-201ENSMUST00000192747 197 ntBASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Trem1Q9JKE2 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.24□□□□□ -2.21
Trem1Q9JKE2 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Snord96a-201ENSMUST00000082791 81 ntBASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Snord7-201ENSMUST00000083781 97 ntBASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.24□□□□□ -2.21
Trem1Q9JKE2 Gm13153-201ENSMUST00000120969 637 ntBASIC1.23□□□□□ -2.21
Trem1Q9JKE2 Gm25543-201ENSMUST00000122678 312 ntBASIC1.23□□□□□ -2.21
Trem1Q9JKE2 Gm26038-201ENSMUST00000158151 106 ntBASIC1.23□□□□□ -2.21
Trem1Q9JKE2 Gm26024-201ENSMUST00000158657 322 ntBASIC1.23□□□□□ -2.21
Trem1Q9JKE2 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.23□□□□□ -2.21
Trem1Q9JKE2 Gm42774-201ENSMUST00000198854 283 ntBASIC1.23□□□□□ -2.21
Trem1Q9JKE2 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.23□□□□□ -2.21
Trem1Q9JKE2 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.23□□□□□ -2.21
Trem1Q9JKE2 Gm23448-201ENSMUST00000083151 104 ntBASIC1.23□□□□□ -2.21
Trem1Q9JKE2 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.23□□□□□ -2.21
Trem1Q9JKE2 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trem1Q9JKE2 Mir1967-201ENSMUST00000157789 82 ntBASIC1.22□□□□□ -2.21
Trem1Q9JKE2 Mir6352-201ENSMUST00000184495 116 ntBASIC1.22□□□□□ -2.21
Trem1Q9JKE2 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.22□□□□□ -2.21
Trem1Q9JKE2 Gm26265-202ENSMUST00000196326 133 ntBASIC1.22□□□□□ -2.21
Trem1Q9JKE2 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.22□□□□□ -2.21
Trem1Q9JKE2 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC1.22□□□□□ -2.21
Trem1Q9JKE2 Gm35736-201ENSMUST00000203681 313 ntBASIC1.22□□□□□ -2.21
Trem1Q9JKE2 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.22□□□□□ -2.21
Trem1Q9JKE2 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Trem1Q9JKE2 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Trem1Q9JKE2 Gm22761-201ENSMUST00000102278 96 ntBASIC1.21□□□□□ -2.22
Trem1Q9JKE2 Gm26424-201ENSMUST00000122530 104 ntBASIC1.21□□□□□ -2.22
Trem1Q9JKE2 Gm24409-201ENSMUST00000157881 152 ntBASIC1.21□□□□□ -2.22
Trem1Q9JKE2 Gm22264-201ENSMUST00000178200 107 ntBASIC1.21□□□□□ -2.22
Trem1Q9JKE2 Gm22166-201ENSMUST00000178419 121 ntBASIC1.21□□□□□ -2.22
Trem1Q9JKE2 Gm23288-201ENSMUST00000179213 121 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms