Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm23760-201ENSMUST00000158350 116 ntBASIC0.52□□□□□ -2.33
Trem3Q9JKE1 Gm25715-201ENSMUST00000158627 125 ntBASIC0.52□□□□□ -2.33
Trem3Q9JKE1 Gm20689-201ENSMUST00000176033 279 ntBASIC0.52□□□□□ -2.33
Trem3Q9JKE1 Gm26968-201ENSMUST00000182894 481 ntBASIC0.52□□□□□ -2.33
Trem3Q9JKE1 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.52□□□□□ -2.33
Trem3Q9JKE1 Gm42533-201ENSMUST00000196247 157 ntBASIC0.52□□□□□ -2.33
Trem3Q9JKE1 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC0.52□□□□□ -2.33
Trem3Q9JKE1 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Trem3Q9JKE1 Gm22750-201ENSMUST00000102076 103 ntBASIC0.51□□□□□ -2.33
Trem3Q9JKE1 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.51□□□□□ -2.33
Trem3Q9JKE1 Gm14638-201ENSMUST00000121338 216 ntBASIC0.51□□□□□ -2.33
Trem3Q9JKE1 Gm24747-201ENSMUST00000157835 87 ntBASIC0.51□□□□□ -2.33
Trem3Q9JKE1 Gm25491-201ENSMUST00000158733 308 ntBASIC0.51□□□□□ -2.33
Trem3Q9JKE1 Gm10177-202ENSMUST00000161698 207 ntBASIC0.51□□□□□ -2.33
Trem3Q9JKE1 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Trem3Q9JKE1 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.51□□□□□ -2.33
Trem3Q9JKE1 Mir7663-201ENSMUST00000183950 61 ntBASIC0.51□□□□□ -2.33
Trem3Q9JKE1 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.51□□□□□ -2.33
Trem3Q9JKE1 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.51□□□□□ -2.33
Trem3Q9JKE1 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.51□□□□□ -2.33
Trem3Q9JKE1 Gm18242-201ENSMUST00000218455 542 ntBASIC0.51□□□□□ -2.33
Trem3Q9JKE1 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.51□□□□□ -2.33
Trem3Q9JKE1 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.51□□□□□ -2.33
Trem3Q9JKE1 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Mir695-201ENSMUST00000102261 109 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm26338-201ENSMUST00000102372 110 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm23011-201ENSMUST00000104148 132 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm25784-201ENSMUST00000122524 81 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm22515-201ENSMUST00000158273 305 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm16038-201ENSMUST00000159317 193 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm17100-201ENSMUST00000168963 272 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm22403-201ENSMUST00000174919 84 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Mir5104-201ENSMUST00000175319 94 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm38231-201ENSMUST00000192030 347 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm37801-201ENSMUST00000194754 274 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm43250-201ENSMUST00000196536 273 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm42475-201ENSMUST00000201212 295 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm46997-201ENSMUST00000222108 217 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Snord32a-201ENSMUST00000083285 83 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm25578-201ENSMUST00000083406 104 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Mir216a-201ENSMUST00000083605 72 ntBASIC0.5□□□□□ -2.33
Trem3Q9JKE1 Gm25506-201ENSMUST00000104339 70 ntBASIC0.49□□□□□ -2.33
Trem3Q9JKE1 Gm22543-201ENSMUST00000104347 94 ntBASIC0.49□□□□□ -2.33
Trem3Q9JKE1 Mir3109-201ENSMUST00000175301 88 ntBASIC0.49□□□□□ -2.33
Trem3Q9JKE1 Gm27545-201ENSMUST00000184755 202 ntBASIC0.49□□□□□ -2.33
Trem3Q9JKE1 Mir7059-201ENSMUST00000184825 59 ntBASIC0.49□□□□□ -2.33
Trem3Q9JKE1 Gm43602-201ENSMUST00000196772 300 ntBASIC0.49□□□□□ -2.33
Trem3Q9JKE1 Gm44326-201ENSMUST00000198226 101 ntBASIC0.49□□□□□ -2.33
Trem3Q9JKE1 Gm45375-201ENSMUST00000210338 280 ntBASIC0.49□□□□□ -2.33
Trem3Q9JKE1 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC0.49□□□□□ -2.33
Trem3Q9JKE1 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.49□□□□□ -2.33
Trem3Q9JKE1 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.49□□□□□ -2.33
Trem3Q9JKE1 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Gm26249-201ENSMUST00000116708 118 ntBASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Gm12779-201ENSMUST00000121496 143 ntBASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Gm15529-201ENSMUST00000121833 994 ntBASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Gm23328-201ENSMUST00000157418 132 ntBASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Gm24401-201ENSMUST00000157868 91 ntBASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Gm23114-201ENSMUST00000158478 117 ntBASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Gm23777-201ENSMUST00000158994 259 ntBASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Gm24306-201ENSMUST00000180229 79 ntBASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Gm18188-201ENSMUST00000219386 478 ntBASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Gm46993-201ENSMUST00000220708 259 ntBASIC0.48□□□□□ -2.33
Trem3Q9JKE1 AC153646.1-201ENSMUST00000223229 1279 ntBASIC0.48□□□□□ -2.33
Trem3Q9JKE1 AC124569.4-201ENSMUST00000223830 1220 ntBASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Trem3Q9JKE1 Gm23836-201ENSMUST00000104434 129 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Gm14793-201ENSMUST00000118739 311 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Gm11572-201ENSMUST00000119164 120 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Gm23568-201ENSMUST00000177960 92 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Gm26435-201ENSMUST00000179026 107 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Gm24829-201ENSMUST00000179245 92 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Gm43911-201ENSMUST00000203097 76 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Gm44487-201ENSMUST00000205145 325 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Gm19855-201ENSMUST00000210145 249 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 AC120553.1-201ENSMUST00000227313 260 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
Trem3Q9JKE1 Mir706-201ENSMUST00000102262 84 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Mir293-201ENSMUST00000104841 80 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm4732-201ENSMUST00000118778 473 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm22236-201ENSMUST00000157093 106 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm24862-201ENSMUST00000179103 79 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm23310-201ENSMUST00000179105 79 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Gm25461-201ENSMUST00000179293 79 ntBASIC0.46□□□□□ -2.34
Trem3Q9JKE1 Mir7050-201ENSMUST00000184636 60 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms