Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Gm25153-201ENSMUST00000157118 156 ntBASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Gm24716-201ENSMUST00000157524 104 ntBASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Gm22316-201ENSMUST00000158012 216 ntBASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Gm25333-201ENSMUST00000158035 246 ntBASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Gm26200-201ENSMUST00000180273 79 ntBASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Gm3852-201ENSMUST00000182781 264 ntBASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Gm43264-201ENSMUST00000202284 325 ntBASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Copb1Q9JIF7 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.72□□□□□ -1.97
Copb1Q9JIF7 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Copb1Q9JIF7 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
Copb1Q9JIF7 Gm24582-201ENSMUST00000103967 103 ntBASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Gm24079-201ENSMUST00000104352 132 ntBASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Mdga2-203ENSMUST00000113942 423 ntBASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Gm5937-201ENSMUST00000119715 643 ntBASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Gm12686-201ENSMUST00000120546 397 ntBASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Gm26099-201ENSMUST00000157248 109 ntBASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Gm23258-201ENSMUST00000158319 106 ntBASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Gm23476-201ENSMUST00000158881 274 ntBASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Mir6336-201ENSMUST00000183581 130 ntBASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Mir7667-201ENSMUST00000183866 63 ntBASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Gm44526-201ENSMUST00000204664 121 ntBASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Gm45859-201ENSMUST00000212794 214 ntBASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.71□□□□□ -1.98
Copb1Q9JIF7 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
Copb1Q9JIF7 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.7□□□□□ -1.98
Copb1Q9JIF7 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
Copb1Q9JIF7 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Copb1Q9JIF7 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Copb1Q9JIF7 Gm24670-201ENSMUST00000104154 132 ntBASIC2.7□□□□□ -1.98
Copb1Q9JIF7 Gm25808-201ENSMUST00000122784 284 ntBASIC2.7□□□□□ -1.98
Copb1Q9JIF7 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.7□□□□□ -1.98
Copb1Q9JIF7 Gm22315-201ENSMUST00000158010 143 ntBASIC2.7□□□□□ -1.98
Copb1Q9JIF7 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.7□□□□□ -1.98
Copb1Q9JIF7 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.7□□□□□ -1.98
Copb1Q9JIF7 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.7□□□□□ -1.98
Copb1Q9JIF7 Gm44853-201ENSMUST00000209070 250 ntBASIC2.7□□□□□ -1.98
Copb1Q9JIF7 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.7□□□□□ -1.98
Copb1Q9JIF7 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.7□□□□□ -1.98
Copb1Q9JIF7 Gm14069-201ENSMUST00000120815 229 ntBASIC2.69□□□□□ -1.98
Copb1Q9JIF7 Gm13862-201ENSMUST00000121220 197 ntBASIC2.69□□□□□ -1.98
Copb1Q9JIF7 Gm24908-201ENSMUST00000157294 127 ntBASIC2.69□□□□□ -1.98
Copb1Q9JIF7 Gm24212-201ENSMUST00000158258 132 ntBASIC2.69□□□□□ -1.98
Copb1Q9JIF7 Gm24358-201ENSMUST00000158424 288 ntBASIC2.69□□□□□ -1.98
Copb1Q9JIF7 Mir6402-201ENSMUST00000183406 80 ntBASIC2.69□□□□□ -1.98
Copb1Q9JIF7 Gm27470-201ENSMUST00000184070 210 ntBASIC2.69□□□□□ -1.98
Copb1Q9JIF7 Gm28849-201ENSMUST00000188127 174 ntBASIC2.69□□□□□ -1.98
Copb1Q9JIF7 Gm28330-201ENSMUST00000190353 171 ntBASIC2.69□□□□□ -1.98
Copb1Q9JIF7 Mir3068-202ENSMUST00000197755 79 ntBASIC2.69□□□□□ -1.98
Copb1Q9JIF7 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.69□□□□□ -1.98
Copb1Q9JIF7 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.69□□□□□ -1.98
Copb1Q9JIF7 Gm9795-201ENSMUST00000062156 693 ntBASIC2.69□□□□□ -1.98
Copb1Q9JIF7 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm22782-201ENSMUST00000104082 132 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm23202-201ENSMUST00000104376 129 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Mir881-201ENSMUST00000104844 78 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Mir466k-201ENSMUST00000116774 122 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm25392-201ENSMUST00000157335 297 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm25454-201ENSMUST00000157947 315 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm24210-201ENSMUST00000158263 133 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm22192-201ENSMUST00000175128 85 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Trbv7-201ENSMUST00000193339 402 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm37089-201ENSMUST00000195616 129 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm15235-201ENSMUST00000200572 194 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm45150-201ENSMUST00000206051 467 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.68□□□□□ -1.98
Copb1Q9JIF7 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm5899-201ENSMUST00000071770 270 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm24356-201ENSMUST00000082859 106 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm25632-201ENSMUST00000083112 85 ntBASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Copb1Q9JIF7 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Copb1Q9JIF7 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 Gm14803-201ENSMUST00000117163 361 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 Gm24892-201ENSMUST00000122747 104 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 Gm25805-201ENSMUST00000122788 108 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 Gm24846-201ENSMUST00000158033 108 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Copb1Q9JIF7 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Copb1Q9JIF7 Gm4468-201ENSMUST00000170206 294 ntBASIC2.67□□□□□ -1.98
Copb1Q9JIF7 Gm20630-201ENSMUST00000177387 551 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 148.7 ms