Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.63□□□□□ -1.99
Trim54Q9ERP3 Gm14894-201ENSMUST00000117170 270 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Gm14774-201ENSMUST00000117857 536 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Gm15379-201ENSMUST00000121224 648 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Gm25945-201ENSMUST00000122484 135 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Gm24635-201ENSMUST00000122712 128 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Gm26105-201ENSMUST00000157253 190 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Gm25012-201ENSMUST00000158396 164 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Gm23579-201ENSMUST00000158528 103 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Gm37449-201ENSMUST00000193016 270 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Gm18658-201ENSMUST00000195558 270 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Gm44477-201ENSMUST00000199661 110 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.62□□□□□ -1.99
Trim54Q9ERP3 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Trim54Q9ERP3 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.62□□□□□ -1.99
Trim54Q9ERP3 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm23472-201ENSMUST00000101806 191 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm25485-201ENSMUST00000104120 132 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Mdga2-203ENSMUST00000113942 423 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm12956-201ENSMUST00000122184 414 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm23232-201ENSMUST00000157300 105 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm22814-201ENSMUST00000157452 104 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm22101-201ENSMUST00000157928 103 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm24212-201ENSMUST00000158258 132 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm16584-201ENSMUST00000159267 189 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm24497-201ENSMUST00000177868 191 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm25020-201ENSMUST00000178071 107 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm22448-201ENSMUST00000179254 107 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm25939-201ENSMUST00000179876 191 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm3852-201ENSMUST00000182781 264 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm20923-201ENSMUST00000190009 319 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm21088-201ENSMUST00000190875 316 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm37713-201ENSMUST00000191746 198 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Trbv18-201ENSMUST00000194256 294 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Mir6925-201ENSMUST00000197857 70 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Mir497-201ENSMUST00000200557 84 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm44473-201ENSMUST00000204039 152 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm45005-201ENSMUST00000206640 157 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm23625-201ENSMUST00000082457 100 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm23444-201ENSMUST00000082922 191 ntBASIC2.61□□□□□ -1.99
Trim54Q9ERP3 Gm23214-201ENSMUST00000122716 157 ntBASIC2.6□□□□□ -1.99
Trim54Q9ERP3 Gm24475-201ENSMUST00000157435 143 ntBASIC2.6□□□□□ -1.99
Trim54Q9ERP3 Gm24304-201ENSMUST00000177635 107 ntBASIC2.6□□□□□ -1.99
Trim54Q9ERP3 Gm26200-201ENSMUST00000180273 79 ntBASIC2.6□□□□□ -1.99
Trim54Q9ERP3 Gm37889-201ENSMUST00000194174 251 ntBASIC2.6□□□□□ -1.99
Trim54Q9ERP3 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.6□□□□□ -1.99
Trim54Q9ERP3 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.6□□□□□ -1.99
Trim54Q9ERP3 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.6□□□□□ -1.99
Trim54Q9ERP3 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trim54Q9ERP3 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trim54Q9ERP3 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trim54Q9ERP3 Gm15536-201ENSMUST00000121411 114 ntBASIC2.59□□□□□ -1.99
Trim54Q9ERP3 Gm29005-201ENSMUST00000186773 320 ntBASIC2.59□□□□□ -1.99
Trim54Q9ERP3 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim54Q9ERP3 Gm36946-201ENSMUST00000192706 435 ntBASIC2.59□□□□□ -1.99
Trim54Q9ERP3 Gm19118-201ENSMUST00000222554 98 ntBASIC2.59□□□□□ -1.99
Trim54Q9ERP3 Gm22062-201ENSMUST00000082563 107 ntBASIC2.59□□□□□ -1.99
Trim54Q9ERP3 Gm25130-201ENSMUST00000082650 156 ntBASIC2.59□□□□□ -1.99
Trim54Q9ERP3 Gm23845-201ENSMUST00000083834 152 ntBASIC2.59□□□□□ -1.99
Trim54Q9ERP3 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.59□□□□□ -1.99
Trim54Q9ERP3 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim54Q9ERP3 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.59□□□□□ -2
Trim54Q9ERP3 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim54Q9ERP3 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.58□□□□□ -2
Trim54Q9ERP3 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim54Q9ERP3 Snora36b-201ENSMUST00000104383 132 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Gm22486-201ENSMUST00000116815 137 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Gm16355-201ENSMUST00000128606 231 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Gm22517-201ENSMUST00000158265 136 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Gm23005-201ENSMUST00000158950 136 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Gm22800-201ENSMUST00000175627 94 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Gm23355-201ENSMUST00000177614 107 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Gm25450-201ENSMUST00000179144 107 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Gm23148-201ENSMUST00000180367 107 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Gm27997-201ENSMUST00000184942 69 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Gm37801-201ENSMUST00000194754 274 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Gm25258-201ENSMUST00000083049 107 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Gm23246-201ENSMUST00000083371 67 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim54Q9ERP3 Gm15101-201ENSMUST00000178818 1502 ntBASIC2.58□□□□□ -2
Trim54Q9ERP3 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Trim54Q9ERP3 Gm22678-201ENSMUST00000116974 101 ntBASIC2.57□□□□□ -2
Trim54Q9ERP3 Gm14803-201ENSMUST00000117163 361 ntBASIC2.57□□□□□ -2
Trim54Q9ERP3 Gm13725-201ENSMUST00000122139 207 ntBASIC2.57□□□□□ -2
Trim54Q9ERP3 Gm23381-201ENSMUST00000157676 94 ntBASIC2.57□□□□□ -2
Trim54Q9ERP3 Gm23474-201ENSMUST00000158884 75 ntBASIC2.57□□□□□ -2
Trim54Q9ERP3 Trbv6-201ENSMUST00000193743 276 ntBASIC2.57□□□□□ -2
Trim54Q9ERP3 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.57□□□□□ -2
Trim54Q9ERP3 Gm42594-201ENSMUST00000199511 246 ntBASIC2.57□□□□□ -2
Trim54Q9ERP3 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.57□□□□□ -2
Trim54Q9ERP3 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.57□□□□□ -2
Trim54Q9ERP3 Gm24356-201ENSMUST00000082859 106 ntBASIC2.57□□□□□ -2
Trim54Q9ERP3 Gm23679-201ENSMUST00000083161 119 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms