Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Mir6346-201ENSMUST00000183982 81 ntBASIC1.84□□□□□ -2.11
Scn4aQ9ER60 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.84□□□□□ -2.11
Scn4aQ9ER60 Gm23614-201ENSMUST00000082598 107 ntBASIC1.84□□□□□ -2.11
Scn4aQ9ER60 Gm26457-201ENSMUST00000082678 78 ntBASIC1.84□□□□□ -2.11
Scn4aQ9ER60 Gm25788-201ENSMUST00000082721 131 ntBASIC1.84□□□□□ -2.11
Scn4aQ9ER60 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Gm24049-201ENSMUST00000102409 100 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Gm24172-201ENSMUST00000104127 117 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Snord98-201ENSMUST00000116819 65 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Gm24481-201ENSMUST00000157210 102 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Gm23120-201ENSMUST00000157654 287 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Gm25711-201ENSMUST00000158633 128 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Gm24084-201ENSMUST00000175173 137 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Gm9830-201ENSMUST00000178509 357 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Gm25121-201ENSMUST00000179846 79 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Gm44482-201ENSMUST00000199232 103 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Gm44726-201ENSMUST00000203427 217 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Gm44870-201ENSMUST00000207291 357 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Gm8125-201ENSMUST00000216602 738 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Gm18696-201ENSMUST00000220103 274 ntBASIC1.84□□□□□ -2.12
Scn4aQ9ER60 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.84□□□□□ -2.12
Scn4aQ9ER60 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Scn4aQ9ER60 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Scn4aQ9ER60 Gm14355-201ENSMUST00000117352 264 ntBASIC1.83□□□□□ -2.12
Scn4aQ9ER60 Gm24438-201ENSMUST00000157893 115 ntBASIC1.83□□□□□ -2.12
Scn4aQ9ER60 Gm26501-201ENSMUST00000178307 107 ntBASIC1.83□□□□□ -2.12
Scn4aQ9ER60 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.83□□□□□ -2.12
Scn4aQ9ER60 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.83□□□□□ -2.12
Scn4aQ9ER60 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.83□□□□□ -2.12
Scn4aQ9ER60 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.83□□□□□ -2.12
Scn4aQ9ER60 Gm26493-201ENSMUST00000083155 136 ntBASIC1.83□□□□□ -2.12
Scn4aQ9ER60 Gm23042-201ENSMUST00000083866 101 ntBASIC1.83□□□□□ -2.12
Scn4aQ9ER60 Gm25497-201ENSMUST00000104425 132 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm14530-201ENSMUST00000122391 333 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm23022-201ENSMUST00000158768 180 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm44666-201ENSMUST00000208544 391 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm29809-201ENSMUST00000218423 493 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm22620-201ENSMUST00000082700 133 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm25651-201ENSMUST00000083782 119 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm14894-201ENSMUST00000117170 270 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm18588-201ENSMUST00000177308 492 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm37449-201ENSMUST00000193016 270 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm18658-201ENSMUST00000195558 270 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm44564-201ENSMUST00000207985 180 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.82□□□□□ -2.12
Scn4aQ9ER60 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.82□□□□□ -2.12
Scn4aQ9ER60 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm24151-201ENSMUST00000082758 141 ntBASIC1.82□□□□□ -2.12
Scn4aQ9ER60 Gm24480-201ENSMUST00000157442 103 ntBASIC1.81□□□□□ -2.12
Scn4aQ9ER60 Mir5101-201ENSMUST00000175181 83 ntBASIC1.81□□□□□ -2.12
Scn4aQ9ER60 Gm24799-201ENSMUST00000178431 79 ntBASIC1.81□□□□□ -2.12
Scn4aQ9ER60 Mir6399-201ENSMUST00000184050 84 ntBASIC1.81□□□□□ -2.12
Scn4aQ9ER60 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Scn4aQ9ER60 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.81□□□□□ -2.12
Scn4aQ9ER60 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.81□□□□□ -2.12
Scn4aQ9ER60 Gm22577-201ENSMUST00000083731 109 ntBASIC1.81□□□□□ -2.12
Scn4aQ9ER60 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm23184-201ENSMUST00000122594 131 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm23469-201ENSMUST00000157131 104 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm27396-201ENSMUST00000157708 58 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm26157-201ENSMUST00000158974 126 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Mir6379-201ENSMUST00000183392 115 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm27539-201ENSMUST00000184971 224 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm18356-201ENSMUST00000185677 623 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm43624-201ENSMUST00000197368 180 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm42807-201ENSMUST00000200141 329 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC1.8□□□□□ -2.12
Scn4aQ9ER60 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.8□□□□□ -2.12
Scn4aQ9ER60 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm12255-201ENSMUST00000117184 284 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm24419-201ENSMUST00000157875 332 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm24409-201ENSMUST00000157881 152 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC1.8□□□□□ -2.12
Scn4aQ9ER60 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.79□□□□□ -2.12
Scn4aQ9ER60 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.79□□□□□ -2.12
Scn4aQ9ER60 Gm25495-201ENSMUST00000104431 131 ntBASIC1.79□□□□□ -2.12
Scn4aQ9ER60 Gm13475-201ENSMUST00000119290 234 ntBASIC1.79□□□□□ -2.12
Scn4aQ9ER60 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.79□□□□□ -2.12
Scn4aQ9ER60 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Scn4aQ9ER60 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.79□□□□□ -2.12
Scn4aQ9ER60 Gm3027-201ENSMUST00000167579 451 ntBASIC1.79□□□□□ -2.12
Scn4aQ9ER60 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.79□□□□□ -2.12
Scn4aQ9ER60 Gm23515-201ENSMUST00000082829 107 ntBASIC1.79□□□□□ -2.12
Scn4aQ9ER60 Gm24632-201ENSMUST00000122770 323 ntBASIC1.78□□□□□ -2.12
Scn4aQ9ER60 Gm15899-201ENSMUST00000128586 238 ntBASIC1.78□□□□□ -2.12
Scn4aQ9ER60 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms