Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Snord14c-201ENSMUST00000101927 86 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm22713-201ENSMUST00000116895 130 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm13588-201ENSMUST00000120026 135 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm12304-201ENSMUST00000120312 385 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm14215-201ENSMUST00000120578 221 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm14069-201ENSMUST00000120815 229 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm22842-201ENSMUST00000157709 118 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm17166-201ENSMUST00000172006 431 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm27753-201ENSMUST00000184742 203 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm32175-201ENSMUST00000193641 346 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Igkv13-76-201ENSMUST00000197621 347 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.6□□□□□ -1.83
Upf1Q9EPU0 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm24204-201ENSMUST00000082950 107 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm23039-201ENSMUST00000083870 161 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm24164-201ENSMUST00000093663 104 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.6□□□□□ -1.83
Upf1Q9EPU0 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.59□□□□□ -1.83
Upf1Q9EPU0 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.59□□□□□ -1.83
Upf1Q9EPU0 Snord19-201ENSMUST00000104609 76 ntBASIC3.59□□□□□ -1.83
Upf1Q9EPU0 Gm16326-201ENSMUST00000162843 414 ntBASIC3.59□□□□□ -1.83
Upf1Q9EPU0 Trbv18-201ENSMUST00000194256 294 ntBASIC3.59□□□□□ -1.83
Upf1Q9EPU0 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.59□□□□□ -1.83
Upf1Q9EPU0 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.59□□□□□ -1.83
Upf1Q9EPU0 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Gm23472-201ENSMUST00000101806 191 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Gm22883-201ENSMUST00000157376 106 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Gm23671-201ENSMUST00000157472 103 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Gm23895-201ENSMUST00000158108 160 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Gm7592-201ENSMUST00000160674 627 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Gm7582-201ENSMUST00000160831 603 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Ear-ps8-201ENSMUST00000161935 354 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Gm24497-201ENSMUST00000177868 191 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Gm24388-201ENSMUST00000177872 107 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Gm26265-202ENSMUST00000196326 133 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Gm45543-201ENSMUST00000209327 88 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Gm23444-201ENSMUST00000082922 191 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.58□□□□□ -1.84
Upf1Q9EPU0 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Gm26423-201ENSMUST00000104277 128 ntBASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Gm26249-201ENSMUST00000116708 118 ntBASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Gm22336-201ENSMUST00000157719 107 ntBASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Gm25015-201ENSMUST00000158400 128 ntBASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Gm29602-201ENSMUST00000186887 442 ntBASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.57□□□□□ -1.84
Upf1Q9EPU0 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.57□□□□□ -1.84
Upf1Q9EPU0 AC168062.3-201ENSMUST00000227025 165 ntBASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Upf1Q9EPU0 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Upf1Q9EPU0 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Upf1Q9EPU0 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Upf1Q9EPU0 Gm12351-201ENSMUST00000118727 292 ntBASIC3.56□□□□□ -1.84
Upf1Q9EPU0 Gm11786-201ENSMUST00000120799 155 ntBASIC3.56□□□□□ -1.84
Upf1Q9EPU0 Gm22988-201ENSMUST00000122759 144 ntBASIC3.56□□□□□ -1.84
Upf1Q9EPU0 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC3.56□□□□□ -1.84
Upf1Q9EPU0 Gm27582-201ENSMUST00000184084 126 ntBASIC3.56□□□□□ -1.84
Upf1Q9EPU0 Gm20144-201ENSMUST00000203031 165 ntBASIC3.56□□□□□ -1.84
Upf1Q9EPU0 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.56□□□□□ -1.84
Upf1Q9EPU0 Gm23247-201ENSMUST00000083373 107 ntBASIC3.56□□□□□ -1.84
Upf1Q9EPU0 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Upf1Q9EPU0 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Upf1Q9EPU0 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm15497-201ENSMUST00000119137 551 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm14843-201ENSMUST00000119596 212 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm26279-201ENSMUST00000157095 102 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm23466-201ENSMUST00000157133 106 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm23670-201ENSMUST00000157469 119 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Mir1967-201ENSMUST00000157789 82 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Mir6399-201ENSMUST00000184050 84 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm45002-201ENSMUST00000208045 120 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm6796-201ENSMUST00000211919 243 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm24950-201ENSMUST00000082768 191 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm25930-201ENSMUST00000082785 107 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm23971-201ENSMUST00000083317 191 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm23849-201ENSMUST00000083833 191 ntBASIC3.55□□□□□ -1.84
Upf1Q9EPU0 Gm26316-201ENSMUST00000083886 191 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms