Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm23122-201ENSMUST00000157645 103 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Gm23589-201ENSMUST00000157660 105 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Gm24901-201ENSMUST00000158125 110 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Gm22075-201ENSMUST00000158599 192 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Mir3057-201ENSMUST00000175040 91 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Gm23090-201ENSMUST00000177331 78 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Gm27326-201ENSMUST00000183504 95 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Gm27265-201ENSMUST00000183559 77 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Mir7j-201ENSMUST00000184427 122 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Gm8151-201ENSMUST00000184817 871 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Gm43245-201ENSMUST00000197603 468 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Gm5001-201ENSMUST00000204361 331 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Gm22985-201ENSMUST00000122754 116 ntBASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Gm22963-201ENSMUST00000157960 91 ntBASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Gm26004-201ENSMUST00000158804 116 ntBASIC1.38□□□□□ -2.19
Cdc40Q9DC48 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Gm28597-201ENSMUST00000187664 666 ntBASIC1.38□□□□□ -2.19
Cdc40Q9DC48 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Gm40810-201ENSMUST00000219149 253 ntBASIC1.38□□□□□ -2.19
Cdc40Q9DC48 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Gm25207-201ENSMUST00000093745 107 ntBASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Cdc40Q9DC48 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Cdc40Q9DC48 Gm23336-201ENSMUST00000117023 123 ntBASIC1.37□□□□□ -2.19
Cdc40Q9DC48 Gm24577-201ENSMUST00000158580 63 ntBASIC1.37□□□□□ -2.19
Cdc40Q9DC48 Gm28794-201ENSMUST00000185276 136 ntBASIC1.37□□□□□ -2.19
Cdc40Q9DC48 Gm29005-201ENSMUST00000186773 320 ntBASIC1.37□□□□□ -2.19
Cdc40Q9DC48 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.37□□□□□ -2.19
Cdc40Q9DC48 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.37□□□□□ -2.19
Cdc40Q9DC48 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.37□□□□□ -2.19
Cdc40Q9DC48 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.37□□□□□ -2.19
Cdc40Q9DC48 Gm16976-205ENSMUST00000227324 226 ntBASIC1.37□□□□□ -2.19
Cdc40Q9DC48 Gm25992-201ENSMUST00000102437 109 ntBASIC1.36□□□□□ -2.19
Cdc40Q9DC48 Gm15526-201ENSMUST00000112504 204 ntBASIC1.36□□□□□ -2.19
Cdc40Q9DC48 Gm12255-201ENSMUST00000117184 284 ntBASIC1.36□□□□□ -2.19
Cdc40Q9DC48 Gm15529-201ENSMUST00000121833 994 ntBASIC1.36□□□□□ -2.19
Cdc40Q9DC48 Gm14364-201ENSMUST00000129209 267 ntBASIC1.36□□□□□ -2.19
Cdc40Q9DC48 Gm22328-201ENSMUST00000158074 112 ntBASIC1.36□□□□□ -2.19
Cdc40Q9DC48 Gm22308-201ENSMUST00000177609 107 ntBASIC1.36□□□□□ -2.19
Cdc40Q9DC48 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Cdc40Q9DC48 Gm36891-201ENSMUST00000191995 655 ntBASIC1.36□□□□□ -2.19
Cdc40Q9DC48 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
Cdc40Q9DC48 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.36□□□□□ -2.19
Cdc40Q9DC48 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.36□□□□□ -2.19
Cdc40Q9DC48 Mir653-201ENSMUST00000102402 85 ntBASIC1.35□□□□□ -2.19
Cdc40Q9DC48 Gm13672-201ENSMUST00000117554 459 ntBASIC1.35□□□□□ -2.19
Cdc40Q9DC48 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.35□□□□□ -2.19
Cdc40Q9DC48 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.35□□□□□ -2.19
Cdc40Q9DC48 Gm23858-201ENSMUST00000158384 106 ntBASIC1.35□□□□□ -2.19
Cdc40Q9DC48 Gm16038-201ENSMUST00000159317 193 ntBASIC1.35□□□□□ -2.19
Cdc40Q9DC48 Mir6388-201ENSMUST00000184417 75 ntBASIC1.35□□□□□ -2.19
Cdc40Q9DC48 Mir6419-201ENSMUST00000184784 113 ntBASIC1.35□□□□□ -2.19
Cdc40Q9DC48 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.35□□□□□ -2.19
Cdc40Q9DC48 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.35□□□□□ -2.19
Cdc40Q9DC48 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.35□□□□□ -2.19
Cdc40Q9DC48 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Cdc40Q9DC48 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Cdc40Q9DC48 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Gm22834-201ENSMUST00000102021 79 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Gm24895-201ENSMUST00000122742 74 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Gm23170-201ENSMUST00000157158 106 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Gm26049-201ENSMUST00000157313 108 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Gm22654-201ENSMUST00000157874 105 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Gm24851-201ENSMUST00000158028 103 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Gm24229-201ENSMUST00000158830 118 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Gm20438-201ENSMUST00000174441 329 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Gm9227-201ENSMUST00000194733 566 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Gm19441-201ENSMUST00000221545 330 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.34□□□□□ -2.19
Cdc40Q9DC48 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.34□□□□□ -2.19
Cdc40Q9DC48 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.33□□□□□ -2.2
Cdc40Q9DC48 Gm25068-201ENSMUST00000103895 110 ntBASIC1.33□□□□□ -2.2
Cdc40Q9DC48 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Cdc40Q9DC48 Gm25054-201ENSMUST00000157370 97 ntBASIC1.33□□□□□ -2.2
Cdc40Q9DC48 Gm22841-201ENSMUST00000158443 62 ntBASIC1.33□□□□□ -2.2
Cdc40Q9DC48 Gm25956-201ENSMUST00000175115 217 ntBASIC1.33□□□□□ -2.2
Cdc40Q9DC48 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Cdc40Q9DC48 Gm27493-201ENSMUST00000184128 78 ntBASIC1.33□□□□□ -2.2
Cdc40Q9DC48 Mir195b-201ENSMUST00000184814 97 ntBASIC1.33□□□□□ -2.2
Cdc40Q9DC48 Gm28343-201ENSMUST00000185386 112 ntBASIC1.33□□□□□ -2.2
Cdc40Q9DC48 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.33□□□□□ -2.2
Cdc40Q9DC48 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms