Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Mir200b-201ENSMUST00000083615 70 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 Gm22851-201ENSMUST00000178741 94 ntBASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 Gm25074-201ENSMUST00000178782 94 ntBASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 Mir7663-201ENSMUST00000183950 61 ntBASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 Gm45907-201ENSMUST00000213023 193 ntBASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 Gm25475-201ENSMUST00000082825 180 ntBASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.1□□□□□ -2.23
Ccdc3Q9D6Y1 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Gm14972-201ENSMUST00000121780 364 ntBASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Gm44458-201ENSMUST00000196594 143 ntBASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Gm44336-201ENSMUST00000203696 468 ntBASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Gm40810-201ENSMUST00000219149 253 ntBASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Gm21937-201ENSMUST00000222825 218 ntBASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Snord14a-201ENSMUST00000082807 87 ntBASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Mir344-201ENSMUST00000083634 95 ntBASIC1.09□□□□□ -2.23
Ccdc3Q9D6Y1 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
Ccdc3Q9D6Y1 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Gm23705-201ENSMUST00000104370 130 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Mir743b-201ENSMUST00000104751 77 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Gm12417-201ENSMUST00000119153 403 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Gm12806-201ENSMUST00000119384 268 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Gm26424-201ENSMUST00000122530 104 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Gm25269-201ENSMUST00000122601 104 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Traj60-201ENSMUST00000167781 54 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Gm24418-201ENSMUST00000177597 79 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Gm24639-201ENSMUST00000178518 79 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Gm23076-201ENSMUST00000179082 79 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Gm25077-201ENSMUST00000179157 79 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Gm37599-201ENSMUST00000193067 489 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Gm37869-201ENSMUST00000193385 595 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Gm23453-201ENSMUST00000083326 106 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Mir221-201ENSMUST00000083488 95 ntBASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.08□□□□□ -2.24
Ccdc3Q9D6Y1 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm25496-201ENSMUST00000104430 120 ntBASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm25109-201ENSMUST00000122474 114 ntBASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Mir1967-201ENSMUST00000157789 82 ntBASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm24315-201ENSMUST00000177835 127 ntBASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Mir496b-201ENSMUST00000184935 113 ntBASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm28995-201ENSMUST00000186625 261 ntBASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm35212-201ENSMUST00000196672 606 ntBASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm10092-201ENSMUST00000077110 180 ntBASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm26493-201ENSMUST00000083155 136 ntBASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Ccdc3Q9D6Y1 Gm25506-201ENSMUST00000104339 70 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 253.7 ms