Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm23858-201ENSMUST00000158384 106 ntBASIC2.23□□□□□ -2.05
Vps28Q9D1C8 Gm26159-201ENSMUST00000158968 104 ntBASIC2.23□□□□□ -2.05
Vps28Q9D1C8 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.23□□□□□ -2.05
Vps28Q9D1C8 Gm26200-201ENSMUST00000180273 79 ntBASIC2.23□□□□□ -2.05
Vps28Q9D1C8 Gm28257-201ENSMUST00000185244 463 ntBASIC2.23□□□□□ -2.05
Vps28Q9D1C8 Gm29229-201ENSMUST00000188874 323 ntBASIC2.23□□□□□ -2.05
Vps28Q9D1C8 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.23□□□□□ -2.05
Vps28Q9D1C8 Gm44960-201ENSMUST00000207403 141 ntBASIC2.23□□□□□ -2.05
Vps28Q9D1C8 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.23□□□□□ -2.05
Vps28Q9D1C8 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
Vps28Q9D1C8 Gm26500-201ENSMUST00000101867 106 ntBASIC2.22□□□□□ -2.05
Vps28Q9D1C8 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.22□□□□□ -2.05
Vps28Q9D1C8 Gm16326-201ENSMUST00000162843 414 ntBASIC2.22□□□□□ -2.05
Vps28Q9D1C8 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.22□□□□□ -2.05
Vps28Q9D1C8 Mir1291-201ENSMUST00000199842 117 ntBASIC2.22□□□□□ -2.05
Vps28Q9D1C8 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Vps28Q9D1C8 Snord42a-201ENSMUST00000082606 65 ntBASIC2.22□□□□□ -2.05
Vps28Q9D1C8 Snora34-201ENSMUST00000083402 138 ntBASIC2.22□□□□□ -2.05
Vps28Q9D1C8 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.22□□□□□ -2.05
Vps28Q9D1C8 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.22□□□□□ -2.05
Vps28Q9D1C8 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Vps28Q9D1C8 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Gm23142-201ENSMUST00000101848 105 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Gm26240-201ENSMUST00000101893 105 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Gm14803-201ENSMUST00000117163 361 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Gm23983-201ENSMUST00000157142 114 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Gm24504-201ENSMUST00000157679 100 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Mir669a-7-201ENSMUST00000180364 87 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Gm19901-201ENSMUST00000192191 495 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Mir669a-6-201ENSMUST00000196127 87 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Mir669a-12-201ENSMUST00000197274 87 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Mir669a-5-201ENSMUST00000197439 87 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Mir669a-10-201ENSMUST00000197745 87 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Mir669a-11-201ENSMUST00000197952 87 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Mir669a-4-201ENSMUST00000198665 87 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Mir669a-9-201ENSMUST00000200087 87 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Mir669a-8-201ENSMUST00000200268 87 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.21□□□□□ -2.06
Vps28Q9D1C8 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Gm24977-201ENSMUST00000083106 163 ntBASIC2.21□□□□□ -2.06
Vps28Q9D1C8 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Gm25094-201ENSMUST00000103992 131 ntBASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Gm25421-201ENSMUST00000104218 164 ntBASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Gm24907-201ENSMUST00000116932 128 ntBASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Gm11859-201ENSMUST00000118099 455 ntBASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Gm22227-201ENSMUST00000157356 259 ntBASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Gm26400-201ENSMUST00000175012 85 ntBASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Gm18357-201ENSMUST00000188184 580 ntBASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Gm44655-201ENSMUST00000207768 423 ntBASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.2□□□□□ -2.06
Vps28Q9D1C8 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.2□□□□□ -2.06
Vps28Q9D1C8 AC154747.1-201ENSMUST00000225265 239 ntBASIC2.2□□□□□ -2.06
Vps28Q9D1C8 Gm22193-201ENSMUST00000116868 76 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm12941-201ENSMUST00000117934 220 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm22338-201ENSMUST00000157715 129 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm24010-201ENSMUST00000157731 282 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm22447-201ENSMUST00000158155 92 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm22085-201ENSMUST00000158344 110 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm22666-201ENSMUST00000158717 164 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm22093-201ENSMUST00000158980 111 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm16584-201ENSMUST00000159267 189 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm24618-201ENSMUST00000177718 94 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm23953-201ENSMUST00000178214 94 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm26332-201ENSMUST00000179813 94 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm22863-201ENSMUST00000180265 94 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm43865-201ENSMUST00000204721 127 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm24152-201ENSMUST00000082764 163 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm22685-201ENSMUST00000082848 106 ntBASIC2.19□□□□□ -2.06
Vps28Q9D1C8 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.18□□□□□ -2.06
Vps28Q9D1C8 Gm6829-201ENSMUST00000119858 360 ntBASIC2.18□□□□□ -2.06
Vps28Q9D1C8 Gm25318-201ENSMUST00000122554 314 ntBASIC2.18□□□□□ -2.06
Vps28Q9D1C8 Gm22731-201ENSMUST00000158086 94 ntBASIC2.18□□□□□ -2.06
Vps28Q9D1C8 Gm29167-201ENSMUST00000190024 377 ntBASIC2.18□□□□□ -2.06
Vps28Q9D1C8 Mir3961-201ENSMUST00000198795 59 ntBASIC2.18□□□□□ -2.06
Vps28Q9D1C8 Snord43-201ENSMUST00000199549 108 ntBASIC2.18□□□□□ -2.06
Vps28Q9D1C8 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.18□□□□□ -2.06
Vps28Q9D1C8 Gm22972-201ENSMUST00000083297 131 ntBASIC2.18□□□□□ -2.06
Vps28Q9D1C8 Mir496a-201ENSMUST00000093627 79 ntBASIC2.18□□□□□ -2.06
Vps28Q9D1C8 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Vps28Q9D1C8 Gm22021-201ENSMUST00000104353 107 ntBASIC2.17□□□□□ -2.06
Vps28Q9D1C8 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.17□□□□□ -2.06
Vps28Q9D1C8 Gm24333-201ENSMUST00000175101 84 ntBASIC2.17□□□□□ -2.06
Vps28Q9D1C8 Gm25671-201ENSMUST00000178612 105 ntBASIC2.17□□□□□ -2.06
Vps28Q9D1C8 Gm23307-201ENSMUST00000179167 105 ntBASIC2.17□□□□□ -2.06
Vps28Q9D1C8 Gm25286-201ENSMUST00000179790 105 ntBASIC2.17□□□□□ -2.06
Vps28Q9D1C8 Gm22263-201ENSMUST00000180060 104 ntBASIC2.17□□□□□ -2.06
Vps28Q9D1C8 Gm28288-201ENSMUST00000191019 214 ntBASIC2.17□□□□□ -2.06
Vps28Q9D1C8 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.17□□□□□ -2.06
Vps28Q9D1C8 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.17□□□□□ -2.06
Vps28Q9D1C8 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 197 ms