Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm23005-201ENSMUST00000158950 136 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Gm7592-201ENSMUST00000160674 627 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Gm24799-201ENSMUST00000178431 79 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Trbv6-201ENSMUST00000193743 276 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Gm22154-201ENSMUST00000083844 131 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm22752-201ENSMUST00000102083 109 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm22151-201ENSMUST00000116963 58 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm23232-201ENSMUST00000157300 105 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm25888-201ENSMUST00000157778 302 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm24618-201ENSMUST00000177718 94 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm23953-201ENSMUST00000178214 94 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm26332-201ENSMUST00000179813 94 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm22863-201ENSMUST00000180265 94 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm36891-201ENSMUST00000191995 655 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm36946-201ENSMUST00000192706 435 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm43250-201ENSMUST00000196536 273 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm43676-201ENSMUST00000197532 540 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm43583-201ENSMUST00000199235 303 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Mir7215-201ENSMUST00000200383 51 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm6796-201ENSMUST00000211919 243 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm24152-201ENSMUST00000082764 163 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Mir30d-201ENSMUST00000083503 82 ntBASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ddx28Q9CWT6 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Gm22494-201ENSMUST00000104495 128 ntBASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Gm14803-201ENSMUST00000117163 361 ntBASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Gm12647-201ENSMUST00000118977 265 ntBASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Gm25059-201ENSMUST00000157367 117 ntBASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Gm22535-201ENSMUST00000158174 119 ntBASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Gm24573-201ENSMUST00000175499 112 ntBASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Gm23963-201ENSMUST00000179603 77 ntBASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Gm25589-201ENSMUST00000082502 166 ntBASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Mir127-201ENSMUST00000093568 70 ntBASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
Ddx28Q9CWT6 Gm26015-201ENSMUST00000104402 125 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Gm24480-201ENSMUST00000157442 103 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Gm24053-201ENSMUST00000158620 105 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Gm25711-201ENSMUST00000158633 128 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Gm16561-201ENSMUST00000163001 192 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Gm25933-201ENSMUST00000178943 108 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Gm27905-201ENSMUST00000184005 207 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Gm27991-201ENSMUST00000184804 137 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Trbv18-201ENSMUST00000194256 294 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Gm44373-201ENSMUST00000196112 169 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Mir7661-201ENSMUST00000197023 61 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Gm26126-201ENSMUST00000083188 164 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Gm25793-201ENSMUST00000083287 107 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.11□□□□□ -2.07
Ddx28Q9CWT6 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Gm13880-201ENSMUST00000118421 474 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Gm14652-201ENSMUST00000118479 235 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Gm25321-201ENSMUST00000122558 102 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Gm23759-201ENSMUST00000158351 268 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Gm23355-201ENSMUST00000177614 107 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Gm23148-201ENSMUST00000180367 107 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Gm37713-201ENSMUST00000191746 198 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Gm43406-201ENSMUST00000200356 334 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Gm44473-201ENSMUST00000204039 152 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Gm24356-201ENSMUST00000082859 106 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Gm25258-201ENSMUST00000083049 107 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Gm22287-201ENSMUST00000083197 107 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Mir32-201ENSMUST00000083610 70 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Gm23851-201ENSMUST00000083831 103 ntBASIC2.1□□□□□ -2.07
Ddx28Q9CWT6 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Gm12351-201ENSMUST00000118727 292 ntBASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Gm12721-201ENSMUST00000120621 268 ntBASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Gm23889-201ENSMUST00000122689 104 ntBASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Gm22216-201ENSMUST00000157557 114 ntBASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Gm22554-201ENSMUST00000157798 147 ntBASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Gm29005-201ENSMUST00000186773 320 ntBASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC2.09□□□□□ -2.07
Ddx28Q9CWT6 Gm25124-201ENSMUST00000083345 164 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms