Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.98□□□□□ -2.09
Smc1aQ9CU62 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Smc1aQ9CU62 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Smc1aQ9CU62 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Gm24172-201ENSMUST00000104127 117 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Gm25054-201ENSMUST00000157370 97 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Gm25384-201ENSMUST00000157807 105 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Gm28414-201ENSMUST00000190111 294 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Gm36953-201ENSMUST00000195295 268 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Mir7021-201ENSMUST00000197026 63 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Gm23627-201ENSMUST00000082459 107 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Gm22502-201ENSMUST00000082488 107 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Gm22977-201ENSMUST00000082615 107 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Gm24149-201ENSMUST00000082757 107 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Gm10360-201ENSMUST00000097219 272 ntBASIC1.97□□□□□ -2.09
Smc1aQ9CU62 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
Smc1aQ9CU62 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
Smc1aQ9CU62 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.96□□□□□ -2.1
Smc1aQ9CU62 Gm23169-201ENSMUST00000157157 112 ntBASIC1.96□□□□□ -2.1
Smc1aQ9CU62 Gm23589-201ENSMUST00000157660 105 ntBASIC1.96□□□□□ -2.1
Smc1aQ9CU62 Gm23557-201ENSMUST00000157820 138 ntBASIC1.96□□□□□ -2.1
Smc1aQ9CU62 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Smc1aQ9CU62 Gm18357-201ENSMUST00000188184 580 ntBASIC1.96□□□□□ -2.1
Smc1aQ9CU62 Mir3961-201ENSMUST00000198795 59 ntBASIC1.96□□□□□ -2.1
Smc1aQ9CU62 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.96□□□□□ -2.1
Smc1aQ9CU62 Gm45375-201ENSMUST00000210338 280 ntBASIC1.96□□□□□ -2.1
Smc1aQ9CU62 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.96□□□□□ -2.1
Smc1aQ9CU62 Gm24623-201ENSMUST00000082616 194 ntBASIC1.96□□□□□ -2.1
Smc1aQ9CU62 Gm22299-201ENSMUST00000082663 136 ntBASIC1.96□□□□□ -2.1
Smc1aQ9CU62 Gm24165-201ENSMUST00000082718 128 ntBASIC1.96□□□□□ -2.1
Smc1aQ9CU62 Gm22997-201ENSMUST00000082845 107 ntBASIC1.96□□□□□ -2.1
Smc1aQ9CU62 Gm23766-201ENSMUST00000103894 80 ntBASIC1.95□□□□□ -2.1
Smc1aQ9CU62 Mir466f-3-201ENSMUST00000104788 94 ntBASIC1.95□□□□□ -2.1
Smc1aQ9CU62 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.95□□□□□ -2.1
Smc1aQ9CU62 Gm24892-201ENSMUST00000122747 104 ntBASIC1.95□□□□□ -2.1
Smc1aQ9CU62 Gm22731-201ENSMUST00000158086 94 ntBASIC1.95□□□□□ -2.1
Smc1aQ9CU62 Gm22386-201ENSMUST00000158192 129 ntBASIC1.95□□□□□ -2.1
Smc1aQ9CU62 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.95□□□□□ -2.1
Smc1aQ9CU62 Gm43914-201ENSMUST00000203592 594 ntBASIC1.95□□□□□ -2.1
Smc1aQ9CU62 Gm45315-201ENSMUST00000209283 333 ntBASIC1.95□□□□□ -2.1
Smc1aQ9CU62 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.95□□□□□ -2.1
Smc1aQ9CU62 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Smc1aQ9CU62 Gm26457-201ENSMUST00000082678 78 ntBASIC1.95□□□□□ -2.1
Smc1aQ9CU62 Gm23453-201ENSMUST00000083326 106 ntBASIC1.95□□□□□ -2.1
Smc1aQ9CU62 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Mir873a-201ENSMUST00000104863 77 ntBASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Snord98-201ENSMUST00000116819 65 ntBASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Gm14269-201ENSMUST00000120455 306 ntBASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Gm24480-201ENSMUST00000157442 103 ntBASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Gm22768-201ENSMUST00000158366 153 ntBASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Gm23181-201ENSMUST00000158685 110 ntBASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Gm37054-201ENSMUST00000193481 543 ntBASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Gm45754-201ENSMUST00000212380 279 ntBASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Gm40810-201ENSMUST00000219149 253 ntBASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.94□□□□□ -2.1
Smc1aQ9CU62 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Smc1aQ9CU62 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm25832-201ENSMUST00000104140 130 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm15010-201ENSMUST00000117153 407 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm13672-201ENSMUST00000117554 459 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm24598-201ENSMUST00000122510 74 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm22654-201ENSMUST00000157874 105 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm16162-201ENSMUST00000162296 297 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm24810-201ENSMUST00000175317 70 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm21815-201ENSMUST00000178213 664 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm20874-201ENSMUST00000178356 663 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm23191-201ENSMUST00000179147 107 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm26180-201ENSMUST00000179942 107 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Smc1aQ9CU62 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm43723-201ENSMUST00000196886 189 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 AC159619.2-201ENSMUST00000222924 401 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm25801-201ENSMUST00000082638 106 ntBASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
Smc1aQ9CU62 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.92□□□□□ -2.1
Smc1aQ9CU62 Gm26396-201ENSMUST00000104093 132 ntBASIC1.92□□□□□ -2.1
Smc1aQ9CU62 Gm14678-201ENSMUST00000121396 482 ntBASIC1.92□□□□□ -2.1
Smc1aQ9CU62 Gm25059-201ENSMUST00000157367 117 ntBASIC1.92□□□□□ -2.1
Smc1aQ9CU62 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.92□□□□□ -2.1
Smc1aQ9CU62 Gm37128-201ENSMUST00000192599 232 ntBASIC1.92□□□□□ -2.1
Smc1aQ9CU62 Gm42570-201ENSMUST00000195937 292 ntBASIC1.92□□□□□ -2.1
Smc1aQ9CU62 Gm44384-201ENSMUST00000200208 114 ntBASIC1.92□□□□□ -2.1
Smc1aQ9CU62 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.92□□□□□ -2.1
Smc1aQ9CU62 Mir429-201ENSMUST00000083493 83 ntBASIC1.92□□□□□ -2.1
Smc1aQ9CU62 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms