Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm26652-202ENSMUST00000181672 475 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Gm19901-201ENSMUST00000192191 495 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Gm25820-202ENSMUST00000197479 128 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Gm45403-201ENSMUST00000209453 276 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Gm26314-201ENSMUST00000083891 107 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm23015-201ENSMUST00000104145 128 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm11386-201ENSMUST00000117761 347 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm12417-201ENSMUST00000119153 403 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm12748-201ENSMUST00000120763 504 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm15899-201ENSMUST00000128586 238 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm22793-201ENSMUST00000157227 330 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm22082-201ENSMUST00000157587 161 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm24222-201ENSMUST00000158834 93 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm9892-201ENSMUST00000182415 992 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Mir6352-201ENSMUST00000184495 116 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm44726-201ENSMUST00000203427 217 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Gm7495-201ENSMUST00000215099 426 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.87□□□□□ -2.11
Ccdc43Q9CR29 Mir669p-2-201ENSMUST00000103868 87 ntBASIC1.86□□□□□ -2.11
Ccdc43Q9CR29 Mir669p-1-201ENSMUST00000103884 87 ntBASIC1.86□□□□□ -2.11
Ccdc43Q9CR29 Gm23109-201ENSMUST00000116867 126 ntBASIC1.86□□□□□ -2.11
Ccdc43Q9CR29 Gm6025-201ENSMUST00000121517 201 ntBASIC1.86□□□□□ -2.11
Ccdc43Q9CR29 Gm22803-201ENSMUST00000158049 283 ntBASIC1.86□□□□□ -2.11
Ccdc43Q9CR29 Gm28848-201ENSMUST00000189984 168 ntBASIC1.86□□□□□ -2.11
Ccdc43Q9CR29 Gm9227-201ENSMUST00000194733 566 ntBASIC1.86□□□□□ -2.11
Ccdc43Q9CR29 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Ccdc43Q9CR29 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Gm26150-201ENSMUST00000157426 151 ntBASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Gm23854-201ENSMUST00000158378 108 ntBASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Mir669n-201ENSMUST00000158636 54 ntBASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Gm45150-201ENSMUST00000206051 467 ntBASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Gm45907-201ENSMUST00000213023 193 ntBASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Gm24615-201ENSMUST00000083268 113 ntBASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Ccdc43Q9CR29 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.84□□□□□ -2.11
Ccdc43Q9CR29 Gm25485-201ENSMUST00000104120 132 ntBASIC1.84□□□□□ -2.11
Ccdc43Q9CR29 Gm6829-201ENSMUST00000119858 360 ntBASIC1.84□□□□□ -2.11
Ccdc43Q9CR29 Gm23169-201ENSMUST00000157157 112 ntBASIC1.84□□□□□ -2.11
Ccdc43Q9CR29 Gm24262-201ENSMUST00000157431 144 ntBASIC1.84□□□□□ -2.11
Ccdc43Q9CR29 Gm22386-201ENSMUST00000158192 129 ntBASIC1.84□□□□□ -2.11
Ccdc43Q9CR29 Mir3057-201ENSMUST00000175040 91 ntBASIC1.84□□□□□ -2.11
Ccdc43Q9CR29 Gm24390-201ENSMUST00000179578 62 ntBASIC1.84□□□□□ -2.11
Ccdc43Q9CR29 Gm9156-201ENSMUST00000189660 463 ntBASIC1.84□□□□□ -2.11
Ccdc43Q9CR29 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc43Q9CR29 Gm20102-201ENSMUST00000222445 220 ntBASIC1.84□□□□□ -2.11
Ccdc43Q9CR29 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.84□□□□□ -2.11
Ccdc43Q9CR29 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc43Q9CR29 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Ccdc43Q9CR29 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Ccdc43Q9CR29 Gm22656-201ENSMUST00000104199 171 ntBASIC1.83□□□□□ -2.12
Ccdc43Q9CR29 Gm27926-201ENSMUST00000157180 66 ntBASIC1.83□□□□□ -2.12
Ccdc43Q9CR29 Gm24005-201ENSMUST00000158459 296 ntBASIC1.83□□□□□ -2.12
Ccdc43Q9CR29 Gm26405-201ENSMUST00000158495 100 ntBASIC1.83□□□□□ -2.12
Ccdc43Q9CR29 Gm25486-201ENSMUST00000158726 63 ntBASIC1.83□□□□□ -2.12
Ccdc43Q9CR29 Cfap61-214ENSMUST00000167179 183 ntBASIC1.83□□□□□ -2.12
Ccdc43Q9CR29 Gm37128-201ENSMUST00000192599 232 ntBASIC1.83□□□□□ -2.12
Ccdc43Q9CR29 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.83□□□□□ -2.12
Ccdc43Q9CR29 Gm43035-201ENSMUST00000197626 517 ntBASIC1.83□□□□□ -2.12
Ccdc43Q9CR29 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.83□□□□□ -2.12
Ccdc43Q9CR29 Snord68-201ENSMUST00000082516 86 ntBASIC1.83□□□□□ -2.12
Ccdc43Q9CR29 Snord118-201ENSMUST00000082965 135 ntBASIC1.83□□□□□ -2.12
Ccdc43Q9CR29 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 Gm23950-201ENSMUST00000104026 129 ntBASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 Gm25371-201ENSMUST00000158162 101 ntBASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 Gm17100-201ENSMUST00000168963 272 ntBASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 Mir7679-201ENSMUST00000183379 63 ntBASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 Mir6419-201ENSMUST00000184784 113 ntBASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 Gm37054-201ENSMUST00000193481 543 ntBASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 AC108945.1-201ENSMUST00000226477 94 ntBASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 Gm23731-201ENSMUST00000083749 107 ntBASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.82□□□□□ -2.12
Ccdc43Q9CR29 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Ccdc43Q9CR29 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Ccdc43Q9CR29 Gm13432-201ENSMUST00000118861 241 ntBASIC1.81□□□□□ -2.12
Ccdc43Q9CR29 Gm11512-201ENSMUST00000119669 663 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 146.3 ms