Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm27711-201ENSMUST00000183802 118 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 Mir6352-201ENSMUST00000184495 116 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 Mir6419-201ENSMUST00000184784 113 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 Gm28343-201ENSMUST00000185386 112 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 Gm28506-201ENSMUST00000189937 150 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 Gm42774-201ENSMUST00000198854 283 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 Gm38395-201ENSMUST00000199904 830 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 Gm44429-201ENSMUST00000203542 186 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 Snora3-201ENSMUST00000083082 132 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 Gm25896-201ENSMUST00000083713 136 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 Gm26314-201ENSMUST00000083891 107 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.11□□□□□ -2.23
RTRAFQ9CQE8 Gm23015-201ENSMUST00000104145 128 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm23907-201ENSMUST00000104595 189 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm14293-201ENSMUST00000118528 577 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm6829-201ENSMUST00000119858 360 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm14392-201ENSMUST00000120332 401 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm14413-201ENSMUST00000122158 408 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm23120-201ENSMUST00000157654 287 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm22099-201ENSMUST00000157925 123 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm23854-201ENSMUST00000158378 108 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm23016-201ENSMUST00000158431 62 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm26405-201ENSMUST00000158495 100 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm22136-201ENSMUST00000158751 268 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Mir7679-201ENSMUST00000183379 63 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm44726-201ENSMUST00000203427 217 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm18453-201ENSMUST00000208000 626 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm45907-201ENSMUST00000213023 193 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm18696-201ENSMUST00000220103 274 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm24977-201ENSMUST00000083106 163 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm22972-201ENSMUST00000083297 131 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm23731-201ENSMUST00000083749 107 ntBASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.1□□□□□ -2.23
RTRAFQ9CQE8 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Gm11598-201ENSMUST00000119257 357 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Gm11606-201ENSMUST00000120706 617 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Gm25914-201ENSMUST00000157618 153 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Gm24393-201ENSMUST00000158135 97 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Gm24358-201ENSMUST00000158424 288 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Gm22944-201ENSMUST00000158662 133 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Gm22663-201ENSMUST00000158721 102 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Gm21754-201ENSMUST00000177550 479 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Gm25314-201ENSMUST00000178810 79 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Gm43993-201ENSMUST00000203972 247 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Gm23097-201ENSMUST00000083448 105 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Mir322-201ENSMUST00000083484 95 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Mir148b-201ENSMUST00000083626 97 ntBASIC1.09□□□□□ -2.23
RTRAFQ9CQE8 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
RTRAFQ9CQE8 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm13433-201ENSMUST00000121701 240 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm22221-201ENSMUST00000157362 103 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm23557-201ENSMUST00000157820 138 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm24851-201ENSMUST00000158028 103 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm26024-201ENSMUST00000158657 322 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm17148-201ENSMUST00000164702 249 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm3027-201ENSMUST00000167579 451 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm22510-201ENSMUST00000179304 79 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm26336-201ENSMUST00000179449 79 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm26390-201ENSMUST00000179628 79 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm27313-201ENSMUST00000183500 142 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm20102-201ENSMUST00000222445 220 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm24615-201ENSMUST00000083268 113 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Mir221-201ENSMUST00000083488 95 ntBASIC1.08□□□□□ -2.24
RTRAFQ9CQE8 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.07□□□□□ -2.24
RTRAFQ9CQE8 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.07□□□□□ -2.24
RTRAFQ9CQE8 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.07□□□□□ -2.24
RTRAFQ9CQE8 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
RTRAFQ9CQE8 Gm23109-201ENSMUST00000116867 126 ntBASIC1.07□□□□□ -2.24
RTRAFQ9CQE8 Gm11386-201ENSMUST00000117761 347 ntBASIC1.07□□□□□ -2.24
RTRAFQ9CQE8 Gm13475-201ENSMUST00000119290 234 ntBASIC1.07□□□□□ -2.24
RTRAFQ9CQE8 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.07□□□□□ -2.24
RTRAFQ9CQE8 Mir6993-201ENSMUST00000184912 65 ntBASIC1.07□□□□□ -2.24
RTRAFQ9CQE8 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.07□□□□□ -2.24
RTRAFQ9CQE8 Gm26265-202ENSMUST00000196326 133 ntBASIC1.07□□□□□ -2.24
RTRAFQ9CQE8 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.07□□□□□ -2.24
RTRAFQ9CQE8 AC114916.1-201ENSMUST00000228465 494 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms