Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm24915-201ENSMUST00000157288 78 ntBASIC1.23□□□□□ -2.21
Use1Q9CQ56 Gm27510-201ENSMUST00000158214 64 ntBASIC1.23□□□□□ -2.21
Use1Q9CQ56 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Use1Q9CQ56 Mir7026-201ENSMUST00000184384 67 ntBASIC1.23□□□□□ -2.21
Use1Q9CQ56 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
Use1Q9CQ56 Gm38261-201ENSMUST00000192608 316 ntBASIC1.23□□□□□ -2.21
Use1Q9CQ56 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.23□□□□□ -2.21
Use1Q9CQ56 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.23□□□□□ -2.21
Use1Q9CQ56 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.23□□□□□ -2.21
Use1Q9CQ56 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.23□□□□□ -2.21
Use1Q9CQ56 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Use1Q9CQ56 Gm26457-201ENSMUST00000082678 78 ntBASIC1.23□□□□□ -2.21
Use1Q9CQ56 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.23□□□□□ -2.21
Use1Q9CQ56 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.22□□□□□ -2.21
Use1Q9CQ56 Gm24865-201ENSMUST00000103246 96 ntBASIC1.22□□□□□ -2.21
Use1Q9CQ56 Gm26249-201ENSMUST00000116708 118 ntBASIC1.22□□□□□ -2.21
Use1Q9CQ56 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.22□□□□□ -2.21
Use1Q9CQ56 Gm24962-201ENSMUST00000157917 109 ntBASIC1.22□□□□□ -2.21
Use1Q9CQ56 Gm16038-201ENSMUST00000159317 193 ntBASIC1.22□□□□□ -2.21
Use1Q9CQ56 Mir195b-201ENSMUST00000184814 97 ntBASIC1.22□□□□□ -2.21
Use1Q9CQ56 Gm35558-203ENSMUST00000222264 204 ntBASIC1.22□□□□□ -2.21
Use1Q9CQ56 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Use1Q9CQ56 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Use1Q9CQ56 Gm12584-201ENSMUST00000117109 1105 ntBASIC1.21□□□□□ -2.22
Use1Q9CQ56 Gm25109-201ENSMUST00000122474 114 ntBASIC1.21□□□□□ -2.22
Use1Q9CQ56 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.21□□□□□ -2.22
Use1Q9CQ56 Gm25054-201ENSMUST00000157370 97 ntBASIC1.21□□□□□ -2.22
Use1Q9CQ56 Gm26149-201ENSMUST00000157432 108 ntBASIC1.21□□□□□ -2.22
Use1Q9CQ56 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Use1Q9CQ56 Gm29005-201ENSMUST00000186773 320 ntBASIC1.21□□□□□ -2.22
Use1Q9CQ56 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Use1Q9CQ56 Gm44491-201ENSMUST00000196794 96 ntBASIC1.21□□□□□ -2.22
Use1Q9CQ56 Gm42774-201ENSMUST00000198854 283 ntBASIC1.21□□□□□ -2.22
Use1Q9CQ56 Gm23370-201ENSMUST00000199545 130 ntBASIC1.21□□□□□ -2.22
Use1Q9CQ56 Gm44142-201ENSMUST00000203358 311 ntBASIC1.21□□□□□ -2.22
Use1Q9CQ56 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.21□□□□□ -2.22
Use1Q9CQ56 Gm26493-201ENSMUST00000083155 136 ntBASIC1.21□□□□□ -2.22
Use1Q9CQ56 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Use1Q9CQ56 Gm23010-201ENSMUST00000104151 126 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 Gm13457-201ENSMUST00000117885 267 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 Gm15214-201ENSMUST00000122155 470 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.2□□□□□ -2.22
Use1Q9CQ56 Gm26049-201ENSMUST00000157313 108 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 Gm23390-201ENSMUST00000157393 106 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 Gm17100-201ENSMUST00000168963 272 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Use1Q9CQ56 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Use1Q9CQ56 Gm19901-201ENSMUST00000192191 495 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 Gm43723-201ENSMUST00000196886 189 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 Gm35736-201ENSMUST00000203681 313 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 Gm44754-201ENSMUST00000208155 400 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 Gm24623-201ENSMUST00000082616 194 ntBASIC1.2□□□□□ -2.22
Use1Q9CQ56 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.19□□□□□ -2.22
Use1Q9CQ56 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Use1Q9CQ56 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Use1Q9CQ56 Gm13153-201ENSMUST00000120969 637 ntBASIC1.19□□□□□ -2.22
Use1Q9CQ56 Gm24668-201ENSMUST00000158935 104 ntBASIC1.19□□□□□ -2.22
Use1Q9CQ56 Gm24366-201ENSMUST00000175383 86 ntBASIC1.19□□□□□ -2.22
Use1Q9CQ56 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.19□□□□□ -2.22
Use1Q9CQ56 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.19□□□□□ -2.22
Use1Q9CQ56 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.19□□□□□ -2.22
Use1Q9CQ56 Gm45456-201ENSMUST00000210841 243 ntBASIC1.19□□□□□ -2.22
Use1Q9CQ56 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Use1Q9CQ56 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.19□□□□□ -2.22
Use1Q9CQ56 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.19□□□□□ -2.22
Use1Q9CQ56 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Use1Q9CQ56 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Gm13588-201ENSMUST00000120026 135 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.18□□□□□ -2.22
Use1Q9CQ56 Gm8121-201ENSMUST00000153583 499 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Mir1967-201ENSMUST00000157789 82 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Gm22164-201ENSMUST00000158413 106 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Gm25831-201ENSMUST00000158924 163 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.18□□□□□ -2.22
Use1Q9CQ56 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Gm16399-201ENSMUST00000181423 219 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Gm27421-201ENSMUST00000184729 167 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Gm27385-201ENSMUST00000184747 104 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Gm34139-201ENSMUST00000196166 294 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.18□□□□□ -2.22
Use1Q9CQ56 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.18□□□□□ -2.22
Use1Q9CQ56 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Snord96a-201ENSMUST00000082791 81 ntBASIC1.18□□□□□ -2.22
Use1Q9CQ56 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Use1Q9CQ56 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Use1Q9CQ56 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.17□□□□□ -2.22
Use1Q9CQ56 Gm26501-201ENSMUST00000178307 107 ntBASIC1.17□□□□□ -2.22
Use1Q9CQ56 Gm23523-201ENSMUST00000180190 107 ntBASIC1.17□□□□□ -2.22
Use1Q9CQ56 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Use1Q9CQ56 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Use1Q9CQ56 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Use1Q9CQ56 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.17□□□□□ -2.22
Use1Q9CQ56 Gm5899-201ENSMUST00000071770 270 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms