Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.69□□□□□ -2.14
Sf3b1Q99NB9 Ear14-201ENSMUST00000049559 468 ntBASIC1.69□□□□□ -2.14
Sf3b1Q99NB9 Mir429-201ENSMUST00000083493 83 ntBASIC1.69□□□□□ -2.14
Sf3b1Q99NB9 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Sf3b1Q99NB9 Mir701-201ENSMUST00000102208 109 ntBASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 Gm23172-201ENSMUST00000157160 124 ntBASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 Gm23858-201ENSMUST00000158384 106 ntBASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 Gm17148-201ENSMUST00000164702 249 ntBASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 Gm22308-201ENSMUST00000177609 107 ntBASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 Gm25121-201ENSMUST00000179846 79 ntBASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 AC108945.1-201ENSMUST00000226477 94 ntBASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 Mir320-201ENSMUST00000083594 82 ntBASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Sf3b1Q99NB9 Gm22199-201ENSMUST00000122660 126 ntBASIC1.67□□□□□ -2.14
Sf3b1Q99NB9 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.67□□□□□ -2.14
Sf3b1Q99NB9 Gm23181-201ENSMUST00000158685 110 ntBASIC1.67□□□□□ -2.14
Sf3b1Q99NB9 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.67□□□□□ -2.14
Sf3b1Q99NB9 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Sf3b1Q99NB9 Gm44429-201ENSMUST00000203542 186 ntBASIC1.67□□□□□ -2.14
Sf3b1Q99NB9 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.67□□□□□ -2.14
Sf3b1Q99NB9 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.67□□□□□ -2.14
Sf3b1Q99NB9 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm12770-201ENSMUST00000121734 462 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm23120-201ENSMUST00000157654 287 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm22551-201ENSMUST00000157795 103 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm23016-201ENSMUST00000158431 62 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm24174-201ENSMUST00000158933 111 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm16162-201ENSMUST00000162296 297 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Snord87-201ENSMUST00000175437 87 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm26652-202ENSMUST00000181672 475 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Mir6351-201ENSMUST00000183826 99 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm28794-201ENSMUST00000185276 136 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm44655-201ENSMUST00000207768 423 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm45402-201ENSMUST00000211796 223 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm25207-201ENSMUST00000093745 107 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm10360-201ENSMUST00000097219 272 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm26474-201ENSMUST00000116762 122 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm13714-201ENSMUST00000117313 221 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm14287-201ENSMUST00000121060 117 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm26430-201ENSMUST00000178054 107 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm27248-201ENSMUST00000184004 166 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm19123-201ENSMUST00000190716 651 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm32175-201ENSMUST00000193641 346 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Mir1291-201ENSMUST00000199842 117 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 Snora34-201ENSMUST00000083402 138 ntBASIC1.66□□□□□ -2.14
Sf3b1Q99NB9 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
Sf3b1Q99NB9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.65□□□□□ -2.15
Sf3b1Q99NB9 Gm22217-201ENSMUST00000157556 313 ntBASIC1.65□□□□□ -2.15
Sf3b1Q99NB9 Gm23022-201ENSMUST00000158768 180 ntBASIC1.65□□□□□ -2.15
Sf3b1Q99NB9 Gm23267-201ENSMUST00000178490 132 ntBASIC1.65□□□□□ -2.15
Sf3b1Q99NB9 Gm25314-201ENSMUST00000178810 79 ntBASIC1.65□□□□□ -2.15
Sf3b1Q99NB9 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.65□□□□□ -2.15
Sf3b1Q99NB9 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.65□□□□□ -2.15
Sf3b1Q99NB9 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.65□□□□□ -2.15
Sf3b1Q99NB9 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.65□□□□□ -2.15
Sf3b1Q99NB9 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.65□□□□□ -2.15
Sf3b1Q99NB9 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Gm15526-201ENSMUST00000112504 204 ntBASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Gm14269-201ENSMUST00000120455 306 ntBASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Gm15115-201ENSMUST00000121145 264 ntBASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Gm14678-201ENSMUST00000121396 482 ntBASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Gm15899-201ENSMUST00000128586 238 ntBASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Gm25958-201ENSMUST00000175114 71 ntBASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Gm18546-201ENSMUST00000197245 676 ntBASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 AC167192.1-201ENSMUST00000225908 139 ntBASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Gm24977-201ENSMUST00000083106 163 ntBASIC1.64□□□□□ -2.15
Sf3b1Q99NB9 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Gm24079-201ENSMUST00000104352 132 ntBASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Snord98-201ENSMUST00000116819 65 ntBASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Gm11386-201ENSMUST00000117761 347 ntBASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Gm20477-201ENSMUST00000174028 280 ntBASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Gm20438-201ENSMUST00000174441 329 ntBASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Gm29005-201ENSMUST00000186773 320 ntBASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.63□□□□□ -2.15
Sf3b1Q99NB9 Gm9227-201ENSMUST00000194733 566 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 110.7 ms