Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.03□□□□□ -2.08
Prpf39Q8K2Z2 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Prpf39Q8K2Z2 Mir107-201ENSMUST00000083660 87 ntBASIC2.03□□□□□ -2.08
Prpf39Q8K2Z2 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Prpf39Q8K2Z2 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Prpf39Q8K2Z2 Gm25848-201ENSMUST00000116790 144 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Gm13433-201ENSMUST00000121701 240 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Gm25059-201ENSMUST00000157367 117 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Mir1949-201ENSMUST00000157434 141 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Mir3086-201ENSMUST00000175072 87 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Gm25707-201ENSMUST00000175120 96 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Gm37399-201ENSMUST00000195224 416 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Gm44482-201ENSMUST00000199232 103 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Gm25589-201ENSMUST00000082502 166 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Snora33-201ENSMUST00000093556 129 ntBASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Prpf39Q8K2Z2 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm42606-201ENSMUST00000114209 239 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm14574-201ENSMUST00000120644 279 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm24478-201ENSMUST00000157439 158 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm22316-201ENSMUST00000158012 216 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm22836-201ENSMUST00000158441 61 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm23024-201ENSMUST00000158770 292 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm24737-201ENSMUST00000158861 100 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm7953-201ENSMUST00000168278 469 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm20613-201ENSMUST00000175828 345 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Mir6901-201ENSMUST00000185062 62 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm27979-201ENSMUST00000185126 56 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm38041-201ENSMUST00000194445 661 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm26314-201ENSMUST00000083891 107 ntBASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Prpf39Q8K2Z2 Gm44114-201ENSMUST00000203270 2727 ntBASIC2□□□□□ -2.09
Prpf39Q8K2Z2 Gm22494-201ENSMUST00000104495 128 ntBASIC2□□□□□ -2.09
Prpf39Q8K2Z2 Trav20-201ENSMUST00000142754 347 ntBASIC2□□□□□ -2.09
Prpf39Q8K2Z2 Gm24005-201ENSMUST00000158459 296 ntBASIC2□□□□□ -2.09
Prpf39Q8K2Z2 Mir3103-201ENSMUST00000175474 67 ntBASIC2□□□□□ -2.09
Prpf39Q8K2Z2 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
Prpf39Q8K2Z2 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2□□□□□ -2.09
Prpf39Q8K2Z2 Gm18357-201ENSMUST00000188184 580 ntBASIC2□□□□□ -2.09
Prpf39Q8K2Z2 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2□□□□□ -2.09
Prpf39Q8K2Z2 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2□□□□□ -2.09
Prpf39Q8K2Z2 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2□□□□□ -2.09
Prpf39Q8K2Z2 AC133598.3-201ENSMUST00000224322 568 ntBASIC2□□□□□ -2.09
Prpf39Q8K2Z2 AC192333.1-201ENSMUST00000224573 376 ntBASIC2□□□□□ -2.09
Prpf39Q8K2Z2 Gm24765-201ENSMUST00000083691 103 ntBASIC2□□□□□ -2.09
Prpf39Q8K2Z2 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Prpf39Q8K2Z2 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Gm23987-201ENSMUST00000117039 129 ntBASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Gm13439-201ENSMUST00000117541 409 ntBASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Gm11786-201ENSMUST00000120799 155 ntBASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Gm25827-201ENSMUST00000157089 107 ntBASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Gm24192-201ENSMUST00000157978 145 ntBASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Gm24726-201ENSMUST00000158232 121 ntBASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Gm27410-201ENSMUST00000183851 115 ntBASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Mir3961-201ENSMUST00000198795 59 ntBASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Gm19572-201ENSMUST00000214326 338 ntBASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 mt-Tr-201ENSMUST00000082412 68 ntBASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Gm23721-201ENSMUST00000083005 107 ntBASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Gm22365-201ENSMUST00000093750 117 ntBASIC1.99□□□□□ -2.09
Prpf39Q8K2Z2 Gm24275-201ENSMUST00000116780 146 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm13396-201ENSMUST00000120617 271 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm13339-201ENSMUST00000120651 510 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm24896-201ENSMUST00000122741 135 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm22227-201ENSMUST00000157356 259 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm23548-201ENSMUST00000158963 106 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm24333-201ENSMUST00000175101 84 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm21885-201ENSMUST00000178891 327 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm5900-201ENSMUST00000179862 375 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Mir6346-201ENSMUST00000183982 81 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm29229-201ENSMUST00000188874 323 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm44938-201ENSMUST00000208614 427 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm5023-201ENSMUST00000217442 587 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm25813-201ENSMUST00000082748 191 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.98□□□□□ -2.09
Prpf39Q8K2Z2 Gm25090-201ENSMUST00000104000 132 ntBASIC1.97□□□□□ -2.09
Prpf39Q8K2Z2 Gm22713-201ENSMUST00000116895 130 ntBASIC1.97□□□□□ -2.09
Prpf39Q8K2Z2 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.97□□□□□ -2.09
Prpf39Q8K2Z2 Gm11935-201ENSMUST00000118608 399 ntBASIC1.97□□□□□ -2.09
Prpf39Q8K2Z2 Gm13518-201ENSMUST00000120018 233 ntBASIC1.97□□□□□ -2.09
Prpf39Q8K2Z2 Gm6956-201ENSMUST00000134724 546 ntBASIC1.97□□□□□ -2.09
Prpf39Q8K2Z2 Gm24724-201ENSMUST00000158230 107 ntBASIC1.97□□□□□ -2.09
Prpf39Q8K2Z2 Gm24770-201ENSMUST00000158505 92 ntBASIC1.97□□□□□ -2.09
Prpf39Q8K2Z2 Gm29397-201ENSMUST00000185205 333 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms