Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Trbv18-201ENSMUST00000194256 294 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm44337-201ENSMUST00000196553 114 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Mir7661-201ENSMUST00000197023 61 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm43583-201ENSMUST00000199235 303 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm44055-201ENSMUST00000204376 247 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 AC165092.3-201ENSMUST00000223602 282 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm25258-201ENSMUST00000083049 107 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm15010-201ENSMUST00000117153 407 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Gm15211-201ENSMUST00000118932 528 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Gm15213-201ENSMUST00000122098 216 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Gm24630-201ENSMUST00000122768 106 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Gm25113-201ENSMUST00000157185 143 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22814-201ENSMUST00000157452 104 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Gm23865-201ENSMUST00000157723 97 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22527-201ENSMUST00000158816 106 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Mir7578-201ENSMUST00000183455 82 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Gm37713-201ENSMUST00000191746 198 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Gm24698-201ENSMUST00000083883 130 ntBASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.13□□□□□ -2.07
Ccdc28bQ8CEG5 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm26500-201ENSMUST00000101867 106 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm24582-201ENSMUST00000103967 103 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22151-201ENSMUST00000116963 58 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm13432-201ENSMUST00000118861 241 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm13967-201ENSMUST00000120404 380 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm25269-201ENSMUST00000122601 104 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm24846-201ENSMUST00000158033 108 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm24726-201ENSMUST00000158232 121 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm24348-201ENSMUST00000158710 130 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm4468-201ENSMUST00000170206 294 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm24799-201ENSMUST00000178431 79 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm28257-201ENSMUST00000185244 463 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Mir3068-202ENSMUST00000197755 79 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm45791-201ENSMUST00000212908 352 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm23731-201ENSMUST00000083749 107 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm10222-201ENSMUST00000088336 294 ntBASIC2.12□□□□□ -2.07
Ccdc28bQ8CEG5 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Gm14748-201ENSMUST00000119819 411 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Gm24908-201ENSMUST00000157294 127 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Mir6379-201ENSMUST00000183392 115 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Mir6355-201ENSMUST00000183687 106 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Gm27521-201ENSMUST00000184022 64 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Gm18357-201ENSMUST00000188184 580 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Gm43193-201ENSMUST00000197732 441 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Mir323-201ENSMUST00000083683 86 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.11□□□□□ -2.07
Ccdc28bQ8CEG5 Gm23803-201ENSMUST00000104610 132 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Gm11572-201ENSMUST00000119164 120 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Gm26105-201ENSMUST00000157253 190 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Gm24958-201ENSMUST00000158009 97 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Gm25718-201ENSMUST00000158632 118 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Gm24308-201ENSMUST00000177773 114 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Gm37104-201ENSMUST00000193278 196 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Gm37763-201ENSMUST00000193445 120 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Mir3535-201ENSMUST00000197651 147 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22062-201ENSMUST00000082563 107 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Gm24152-201ENSMUST00000082764 163 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Gm23247-201ENSMUST00000083373 107 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Mir32-201ENSMUST00000083610 70 ntBASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Ccdc28bQ8CEG5 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 108.9 ms