Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.33□□□□□ -2.04
Nup88Q8CEC0 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.33□□□□□ -2.04
Nup88Q8CEC0 Gm22866-201ENSMUST00000083947 177 ntBASIC2.33□□□□□ -2.04
Nup88Q8CEC0 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Nup88Q8CEC0 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.33□□□□□ -2.04
Nup88Q8CEC0 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Nup88Q8CEC0 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.32□□□□□ -2.04
Nup88Q8CEC0 Gm16328-201ENSMUST00000126985 196 ntBASIC2.32□□□□□ -2.04
Nup88Q8CEC0 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.32□□□□□ -2.04
Nup88Q8CEC0 Gm25711-201ENSMUST00000158633 128 ntBASIC2.32□□□□□ -2.04
Nup88Q8CEC0 Gm20462-201ENSMUST00000172623 408 ntBASIC2.32□□□□□ -2.04
Nup88Q8CEC0 Gm44533-201ENSMUST00000207782 268 ntBASIC2.32□□□□□ -2.04
Nup88Q8CEC0 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.32□□□□□ -2.04
Nup88Q8CEC0 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.32□□□□□ -2.04
Nup88Q8CEC0 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.32□□□□□ -2.04
Nup88Q8CEC0 Gm7214-201ENSMUST00000222428 272 ntBASIC2.32□□□□□ -2.04
Nup88Q8CEC0 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.32□□□□□ -2.04
Nup88Q8CEC0 Gm25135-201ENSMUST00000082648 143 ntBASIC2.32□□□□□ -2.04
Nup88Q8CEC0 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.32□□□□□ -2.04
Nup88Q8CEC0 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Nup88Q8CEC0 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm23142-201ENSMUST00000101848 105 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm26240-201ENSMUST00000101893 105 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm23109-201ENSMUST00000116867 126 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm23435-201ENSMUST00000157183 156 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm25059-201ENSMUST00000157367 117 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm29397-201ENSMUST00000185205 333 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm28951-201ENSMUST00000190742 313 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm32033-201ENSMUST00000193483 339 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm43976-201ENSMUST00000203637 235 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm43884-201ENSMUST00000204251 559 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm44687-201ENSMUST00000204975 235 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm44564-201ENSMUST00000207985 180 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Gm45654-201ENSMUST00000210980 123 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Snord68-201ENSMUST00000082516 86 ntBASIC2.31□□□□□ -2.04
Nup88Q8CEC0 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Nup88Q8CEC0 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Nup88Q8CEC0 Gm24480-201ENSMUST00000157442 103 ntBASIC2.3□□□□□ -2.04
Nup88Q8CEC0 Gm28995-201ENSMUST00000186625 261 ntBASIC2.3□□□□□ -2.04
Nup88Q8CEC0 Gm42672-201ENSMUST00000197821 352 ntBASIC2.3□□□□□ -2.04
Nup88Q8CEC0 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.3□□□□□ -2.04
Nup88Q8CEC0 Gm44654-201ENSMUST00000208052 329 ntBASIC2.3□□□□□ -2.04
Nup88Q8CEC0 Gm45386-201ENSMUST00000210194 218 ntBASIC2.3□□□□□ -2.04
Nup88Q8CEC0 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.3□□□□□ -2.04
Nup88Q8CEC0 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.3□□□□□ -2.04
Nup88Q8CEC0 Gm25589-201ENSMUST00000082502 166 ntBASIC2.3□□□□□ -2.04
Nup88Q8CEC0 Mir30d-201ENSMUST00000083503 82 ntBASIC2.3□□□□□ -2.04
Nup88Q8CEC0 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.3□□□□□ -2.04
Nup88Q8CEC0 Gm14588-201ENSMUST00000119895 172 ntBASIC2.29□□□□□ -2.04
Nup88Q8CEC0 Gm22727-201ENSMUST00000158090 116 ntBASIC2.29□□□□□ -2.04
Nup88Q8CEC0 Gm23813-201ENSMUST00000175153 77 ntBASIC2.29□□□□□ -2.04
Nup88Q8CEC0 Gm20613-201ENSMUST00000175828 345 ntBASIC2.29□□□□□ -2.04
Nup88Q8CEC0 Gm27979-201ENSMUST00000185126 56 ntBASIC2.29□□□□□ -2.04
Nup88Q8CEC0 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
Nup88Q8CEC0 Gm28848-201ENSMUST00000189984 168 ntBASIC2.29□□□□□ -2.04
Nup88Q8CEC0 Gm37162-201ENSMUST00000191708 551 ntBASIC2.29□□□□□ -2.04
Nup88Q8CEC0 Gm43676-201ENSMUST00000197532 540 ntBASIC2.29□□□□□ -2.04
Nup88Q8CEC0 Gm44429-201ENSMUST00000203542 186 ntBASIC2.29□□□□□ -2.04
Nup88Q8CEC0 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.29□□□□□ -2.04
Nup88Q8CEC0 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.29□□□□□ -2.04
Nup88Q8CEC0 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.29□□□□□ -2.04
Nup88Q8CEC0 Gm23041-201ENSMUST00000083868 106 ntBASIC2.29□□□□□ -2.04
Nup88Q8CEC0 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.28□□□□□ -2.04
Nup88Q8CEC0 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.28□□□□□ -2.04
Nup88Q8CEC0 Gm22713-201ENSMUST00000116895 130 ntBASIC2.28□□□□□ -2.04
Nup88Q8CEC0 Gm22836-201ENSMUST00000158441 61 ntBASIC2.28□□□□□ -2.04
Nup88Q8CEC0 Gm24487-201ENSMUST00000178017 63 ntBASIC2.28□□□□□ -2.04
Nup88Q8CEC0 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.28□□□□□ -2.04
Nup88Q8CEC0 Gm44010-201ENSMUST00000204432 331 ntBASIC2.28□□□□□ -2.04
Nup88Q8CEC0 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.28□□□□□ -2.04
Nup88Q8CEC0 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.28□□□□□ -2.04
Nup88Q8CEC0 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.28□□□□□ -2.04
Nup88Q8CEC0 Gm23731-201ENSMUST00000083749 107 ntBASIC2.28□□□□□ -2.04
Nup88Q8CEC0 Mir496a-201ENSMUST00000093627 79 ntBASIC2.28□□□□□ -2.04
Nup88Q8CEC0 Gm14670-201ENSMUST00000117327 337 ntBASIC2.27□□□□□ -2.05
Nup88Q8CEC0 Gm13729-201ENSMUST00000120328 406 ntBASIC2.27□□□□□ -2.05
Nup88Q8CEC0 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.27□□□□□ -2.05
Nup88Q8CEC0 Gm25543-201ENSMUST00000122678 312 ntBASIC2.27□□□□□ -2.05
Nup88Q8CEC0 Gm25115-201ENSMUST00000157187 140 ntBASIC2.27□□□□□ -2.05
Nup88Q8CEC0 Gm23043-201ENSMUST00000157890 109 ntBASIC2.27□□□□□ -2.05
Nup88Q8CEC0 Gm17161-201ENSMUST00000169187 524 ntBASIC2.27□□□□□ -2.05
Nup88Q8CEC0 Gm27410-201ENSMUST00000183851 115 ntBASIC2.27□□□□□ -2.05
Nup88Q8CEC0 Mir7217-201ENSMUST00000200304 62 ntBASIC2.27□□□□□ -2.05
Nup88Q8CEC0 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Nup88Q8CEC0 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.27□□□□□ -2.05
Nup88Q8CEC0 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Nup88Q8CEC0 Gm26922-201ENSMUST00000082687 72 ntBASIC2.27□□□□□ -2.05
Nup88Q8CEC0 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Nup88Q8CEC0 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Gm14748-201ENSMUST00000119819 411 ntBASIC2.26□□□□□ -2.05
Nup88Q8CEC0 Gm24770-201ENSMUST00000158505 92 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 141.1 ms