Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm22713-201ENSMUST00000116895 130 ntBASIC1.9□□□□□ -2.11
Ccdc38Q8CDN8 Gm6444-201ENSMUST00000119611 458 ntBASIC1.9□□□□□ -2.11
Ccdc38Q8CDN8 Gm24598-201ENSMUST00000122510 74 ntBASIC1.9□□□□□ -2.11
Ccdc38Q8CDN8 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.9□□□□□ -2.11
Ccdc38Q8CDN8 Gm24726-201ENSMUST00000158232 121 ntBASIC1.9□□□□□ -2.11
Ccdc38Q8CDN8 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.9□□□□□ -2.11
Ccdc38Q8CDN8 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Ccdc38Q8CDN8 Gm36953-201ENSMUST00000195295 268 ntBASIC1.9□□□□□ -2.11
Ccdc38Q8CDN8 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.9□□□□□ -2.11
Ccdc38Q8CDN8 Mir151-201ENSMUST00000083678 68 ntBASIC1.9□□□□□ -2.11
Ccdc38Q8CDN8 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Gm15010-201ENSMUST00000117153 407 ntBASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Gm14674-201ENSMUST00000117816 342 ntBASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Gm22731-201ENSMUST00000158086 94 ntBASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Gm26194-201ENSMUST00000175036 71 ntBASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Gm24333-201ENSMUST00000175101 84 ntBASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Gm24085-201ENSMUST00000175172 116 ntBASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Snord43-201ENSMUST00000199549 108 ntBASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Gm3867-201ENSMUST00000086108 279 ntBASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ccdc38Q8CDN8 Gm26249-201ENSMUST00000116708 118 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Gm22073-201ENSMUST00000122668 189 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Mir1949-201ENSMUST00000157434 141 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Gm20438-201ENSMUST00000174441 329 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Mir7226-201ENSMUST00000184953 60 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Gm43367-201ENSMUST00000199986 625 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Gm44384-201ENSMUST00000200208 114 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Gm24805-201ENSMUST00000082931 104 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Gm26175-201ENSMUST00000083794 131 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.88□□□□□ -2.11
Ccdc38Q8CDN8 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC1.87□□□□□ -2.11
Ccdc38Q8CDN8 Gm11512-201ENSMUST00000119669 663 ntBASIC1.87□□□□□ -2.11
Ccdc38Q8CDN8 Gm25279-201ENSMUST00000122608 133 ntBASIC1.87□□□□□ -2.11
Ccdc38Q8CDN8 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.87□□□□□ -2.11
Ccdc38Q8CDN8 Gm24499-201ENSMUST00000158446 104 ntBASIC1.87□□□□□ -2.11
Ccdc38Q8CDN8 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.87□□□□□ -2.11
Ccdc38Q8CDN8 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.87□□□□□ -2.11
Ccdc38Q8CDN8 Mir7679-201ENSMUST00000183379 63 ntBASIC1.87□□□□□ -2.11
Ccdc38Q8CDN8 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC1.87□□□□□ -2.11
Ccdc38Q8CDN8 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Ccdc38Q8CDN8 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.87□□□□□ -2.11
Ccdc38Q8CDN8 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 Gm24079-201ENSMUST00000104352 132 ntBASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 Gm23109-201ENSMUST00000116867 126 ntBASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 Gm11359-201ENSMUST00000120039 567 ntBASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 Gm24211-201ENSMUST00000158264 107 ntBASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 Gm23858-201ENSMUST00000158384 106 ntBASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 Gm26024-201ENSMUST00000158657 322 ntBASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 Gm22299-201ENSMUST00000082663 136 ntBASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Ccdc38Q8CDN8 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 Gm25543-201ENSMUST00000122678 312 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 Gm22338-201ENSMUST00000157715 129 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 Gm22315-201ENSMUST00000158010 143 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 Gm24858-201ENSMUST00000158058 323 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 Mir669n-201ENSMUST00000158636 54 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 Snord87-201ENSMUST00000175437 87 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 Gm44429-201ENSMUST00000203542 186 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 Gm44811-201ENSMUST00000209120 228 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 AC164297.5-201ENSMUST00000224365 198 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 CT010505.1-201ENSMUST00000227026 396 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 Gm23731-201ENSMUST00000083749 107 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.85□□□□□ -2.11
Ccdc38Q8CDN8 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Gm22193-201ENSMUST00000116868 76 ntBASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Gm14678-201ENSMUST00000121396 482 ntBASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Gm23172-201ENSMUST00000157160 124 ntBASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Gm25970-201ENSMUST00000157165 86 ntBASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Gm22435-201ENSMUST00000158552 128 ntBASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Gm23090-201ENSMUST00000177331 78 ntBASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Gm23660-201ENSMUST00000178362 79 ntBASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Gm24088-201ENSMUST00000179100 79 ntBASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.84□□□□□ -2.11
Ccdc38Q8CDN8 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms