Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.9□□□□□ -2.27
Trub1Q8C0D0 Rnu7-201ENSMUST00000158458 62 ntBASIC0.9□□□□□ -2.27
Trub1Q8C0D0 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.9□□□□□ -2.27
Trub1Q8C0D0 Mir8119-201ENSMUST00000183371 129 ntBASIC0.9□□□□□ -2.27
Trub1Q8C0D0 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Trub1Q8C0D0 Gm27587-201ENSMUST00000185116 163 ntBASIC0.9□□□□□ -2.27
Trub1Q8C0D0 Gm9156-201ENSMUST00000189660 463 ntBASIC0.9□□□□□ -2.27
Trub1Q8C0D0 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.9□□□□□ -2.27
Trub1Q8C0D0 Gm43035-201ENSMUST00000197626 517 ntBASIC0.9□□□□□ -2.27
Trub1Q8C0D0 Gm23370-201ENSMUST00000199545 130 ntBASIC0.9□□□□□ -2.27
Trub1Q8C0D0 CT025689.4-201ENSMUST00000225926 601 ntBASIC0.9□□□□□ -2.27
Trub1Q8C0D0 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.9□□□□□ -2.27
Trub1Q8C0D0 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
Trub1Q8C0D0 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm15214-201ENSMUST00000122155 470 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm25715-201ENSMUST00000158627 125 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm3111-201ENSMUST00000167426 490 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm21815-201ENSMUST00000178213 664 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm20874-201ENSMUST00000178356 663 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm22263-201ENSMUST00000180060 104 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm44491-201ENSMUST00000196794 96 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm17906-201ENSMUST00000202480 901 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm44449-201ENSMUST00000203610 153 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm44135-201ENSMUST00000205221 368 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm45366-201ENSMUST00000209828 384 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.89□□□□□ -2.27
Trub1Q8C0D0 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 AC156790.3-201ENSMUST00000226200 254 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.89□□□□□ -2.27
Trub1Q8C0D0 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Mir544-201ENSMUST00000103813 78 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm24282-201ENSMUST00000104232 66 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm13457-201ENSMUST00000117885 267 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm23329-201ENSMUST00000157415 108 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm24668-201ENSMUST00000158935 104 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm23725-201ENSMUST00000177876 107 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm22851-201ENSMUST00000178741 94 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm25074-201ENSMUST00000178782 94 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm7258-201ENSMUST00000179317 300 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm28740-201ENSMUST00000186142 215 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm19901-201ENSMUST00000192191 495 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm34139-201ENSMUST00000196166 294 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm43513-201ENSMUST00000199779 1076 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.88□□□□□ -2.27
Trub1Q8C0D0 AC153968.2-201ENSMUST00000215579 1140 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm26457-201ENSMUST00000082678 78 ntBASIC0.88□□□□□ -2.27
Trub1Q8C0D0 Gm24172-201ENSMUST00000104127 117 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm16242-201ENSMUST00000117741 334 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm22551-201ENSMUST00000157795 103 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm25384-201ENSMUST00000157807 105 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm22328-201ENSMUST00000158074 112 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Mir7663-201ENSMUST00000183950 61 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Mir7009-201ENSMUST00000184519 64 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Mir7059-201ENSMUST00000184825 59 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm29613-201ENSMUST00000185846 313 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm29544-201ENSMUST00000188860 313 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm28912-201ENSMUST00000189001 234 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm28808-201ENSMUST00000190978 313 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm37693-201ENSMUST00000194562 234 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm34073-201ENSMUST00000195736 212 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm44320-201ENSMUST00000199276 86 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Mir691-201ENSMUST00000199719 78 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm44429-201ENSMUST00000203542 186 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm7495-201ENSMUST00000215099 426 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 AC153141.1-201ENSMUST00000218636 501 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 AC153864.2-201ENSMUST00000220424 292 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Snord96a-201ENSMUST00000082791 81 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Mir27b-201ENSMUST00000083541 73 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.87□□□□□ -2.27
Trub1Q8C0D0 Mir465c-2-201ENSMUST00000104757 81 ntBASIC0.86□□□□□ -2.27
Trub1Q8C0D0 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
Trub1Q8C0D0 Gm23025-201ENSMUST00000158769 111 ntBASIC0.86□□□□□ -2.27
Trub1Q8C0D0 Gm16038-201ENSMUST00000159317 193 ntBASIC0.86□□□□□ -2.27
Trub1Q8C0D0 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
Trub1Q8C0D0 Gm23145-201ENSMUST00000178912 79 ntBASIC0.86□□□□□ -2.27
Trub1Q8C0D0 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
Trub1Q8C0D0 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.86□□□□□ -2.27
Trub1Q8C0D0 Gm27624-201ENSMUST00000185047 177 ntBASIC0.86□□□□□ -2.27
Trub1Q8C0D0 Gm28409-201ENSMUST00000187064 103 ntBASIC0.86□□□□□ -2.27
Trub1Q8C0D0 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.86□□□□□ -2.27
Trub1Q8C0D0 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.86□□□□□ -2.27
Trub1Q8C0D0 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.86□□□□□ -2.27
Trub1Q8C0D0 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
Trub1Q8C0D0 Mir465c-1-201ENSMUST00000093560 81 ntBASIC0.86□□□□□ -2.27
Trub1Q8C0D0 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.85□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 297.4 ms