Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Snord14a-201ENSMUST00000082807 87 ntBASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Gm22723-201ENSMUST00000083820 129 ntBASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Gm25485-201ENSMUST00000104120 132 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Gm13439-201ENSMUST00000117541 409 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Gm12351-201ENSMUST00000118727 292 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Gm11359-201ENSMUST00000120039 567 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Gm24409-201ENSMUST00000157881 152 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Rnu7-201ENSMUST00000158458 62 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Gm24551-201ENSMUST00000158645 92 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Gm16038-201ENSMUST00000159317 193 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Gm25121-201ENSMUST00000179846 79 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Gm28995-201ENSMUST00000186625 261 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Gm29013-201ENSMUST00000187431 237 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Snora3-201ENSMUST00000083082 132 ntBASIC1.64□□□□□ -2.15
Ccdc40Q8BI79 Gm25414-201ENSMUST00000101814 107 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Mir701-201ENSMUST00000102208 109 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Gm27957-201ENSMUST00000184054 127 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Gm27919-201ENSMUST00000185163 107 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Gm28506-201ENSMUST00000189937 150 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Gm45207-201ENSMUST00000207469 145 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Gm10092-201ENSMUST00000077110 180 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Gm24615-201ENSMUST00000083268 113 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Mir148b-201ENSMUST00000083626 97 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.63□□□□□ -2.15
Ccdc40Q8BI79 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Gm23656-201ENSMUST00000122626 112 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Gm25914-201ENSMUST00000157618 153 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Gm26405-201ENSMUST00000158495 100 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Gm25836-201ENSMUST00000158918 123 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Gm17100-201ENSMUST00000168963 272 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Gm26335-201ENSMUST00000178449 107 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Gm25253-201ENSMUST00000179958 107 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Gm45654-201ENSMUST00000210980 123 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 AC120394.1-201ENSMUST00000217153 351 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 AC154484.1-201ENSMUST00000227311 771 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Gm24536-201ENSMUST00000083144 107 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Mir221-201ENSMUST00000083488 95 ntBASIC1.62□□□□□ -2.15
Ccdc40Q8BI79 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 Gm12255-201ENSMUST00000117184 284 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 Gm25423-201ENSMUST00000157609 107 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 Gm24726-201ENSMUST00000158232 121 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 Gm24174-201ENSMUST00000158933 111 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 Gm24390-201ENSMUST00000179578 62 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 Gm29397-201ENSMUST00000185205 333 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 Gm25820-202ENSMUST00000197479 128 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 Gm44962-201ENSMUST00000206460 279 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Ccdc40Q8BI79 Gm22761-201ENSMUST00000102278 96 ntBASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 Gm14293-201ENSMUST00000118528 577 ntBASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 Gm13341-201ENSMUST00000120780 672 ntBASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 Gm24577-201ENSMUST00000158580 63 ntBASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 Gm37579-201ENSMUST00000194291 142 ntBASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 Gm44483-201ENSMUST00000197203 97 ntBASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 Gm45456-201ENSMUST00000210841 243 ntBASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 Gm18113-201ENSMUST00000220630 303 ntBASIC1.6□□□□□ -2.15
Ccdc40Q8BI79 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Ccdc40Q8BI79 Gm14937-201ENSMUST00000119709 208 ntBASIC1.59□□□□□ -2.15
Ccdc40Q8BI79 Gm24895-201ENSMUST00000122742 74 ntBASIC1.59□□□□□ -2.15
Ccdc40Q8BI79 Gm14364-201ENSMUST00000129209 267 ntBASIC1.59□□□□□ -2.15
Ccdc40Q8BI79 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.59□□□□□ -2.15
Ccdc40Q8BI79 Gm23390-201ENSMUST00000157393 106 ntBASIC1.59□□□□□ -2.15
Ccdc40Q8BI79 Gm22099-201ENSMUST00000157925 123 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms