Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm22288-201ENSMUST00000179904 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22645-201ENSMUST00000180010 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm24565-201ENSMUST00000180099 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm23805-201ENSMUST00000180129 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm23512-201ENSMUST00000180237 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm25327-201ENSMUST00000180263 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm26058-201ENSMUST00000180294 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22418-201ENSMUST00000180326 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm27898-201ENSMUST00000183987 80 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm44337-201ENSMUST00000196553 114 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm23629-201ENSMUST00000082465 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm23924-201ENSMUST00000082474 108 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22246-201ENSMUST00000082478 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22749-201ENSMUST00000082490 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22747-201ENSMUST00000082495 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22063-201ENSMUST00000082560 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm23057-201ENSMUST00000082801 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm26331-201ENSMUST00000082824 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm24205-201ENSMUST00000082953 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm25405-201ENSMUST00000082973 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22628-201ENSMUST00000082988 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm26324-201ENSMUST00000083073 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Snora3-201ENSMUST00000083082 132 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm24535-201ENSMUST00000083140 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm26496-201ENSMUST00000083150 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm26127-201ENSMUST00000083193 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm24456-201ENSMUST00000083198 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm24458-201ENSMUST00000083204 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm24018-201ENSMUST00000083232 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm25790-201ENSMUST00000083293 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22295-201ENSMUST00000083311 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm25127-201ENSMUST00000083336 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm25583-201ENSMUST00000083413 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm25577-201ENSMUST00000083414 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm24414-201ENSMUST00000083434 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm24861-201ENSMUST00000083459 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm24803-201ENSMUST00000083693 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm23103-201ENSMUST00000083725 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22580-201ENSMUST00000083727 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm24260-201ENSMUST00000083741 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm23732-201ENSMUST00000083751 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22682-201ENSMUST00000083854 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm25869-201ENSMUST00000083855 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm24693-201ENSMUST00000083885 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm26317-201ENSMUST00000083894 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22352-201ENSMUST00000083917 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm24448-201ENSMUST00000083979 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22798-201ENSMUST00000083992 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm26427-201ENSMUST00000093648 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22886-201ENSMUST00000093714 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Gm22170-201ENSMUST00000097247 107 ntBASIC1.2□□□□□ -2.22
Clrn3Q8BHH8 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Gm25938-201ENSMUST00000104139 166 ntBASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Gm25495-201ENSMUST00000104431 131 ntBASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Gm23907-201ENSMUST00000104595 189 ntBASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Gm11857-201ENSMUST00000119817 324 ntBASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Gm23557-201ENSMUST00000157820 138 ntBASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Rnu7-201ENSMUST00000158458 62 ntBASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Gm20874-201ENSMUST00000178356 663 ntBASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Mir7675-201ENSMUST00000184262 58 ntBASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Gm45456-201ENSMUST00000210841 243 ntBASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Gm26457-201ENSMUST00000082678 78 ntBASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Gm26066-201ENSMUST00000083385 109 ntBASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Mir340-201ENSMUST00000083483 98 ntBASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Gm25859-201ENSMUST00000083710 91 ntBASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Clrn3Q8BHH8 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm15162-201ENSMUST00000119325 283 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm15214-201ENSMUST00000122155 470 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm22537-201ENSMUST00000158172 199 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm22944-201ENSMUST00000158662 133 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm25121-201ENSMUST00000179846 79 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm27421-201ENSMUST00000184729 167 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm27385-201ENSMUST00000184747 104 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm8151-201ENSMUST00000184817 871 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm29350-201ENSMUST00000189141 541 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm28926-201ENSMUST00000191063 680 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm44491-201ENSMUST00000196794 96 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Gm42774-201ENSMUST00000198854 283 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.18□□□□□ -2.22
Clrn3Q8BHH8 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Clrn3Q8BHH8 Gm12512-201ENSMUST00000119620 217 ntBASIC1.17□□□□□ -2.22
Clrn3Q8BHH8 Gm25054-201ENSMUST00000157370 97 ntBASIC1.17□□□□□ -2.22
Clrn3Q8BHH8 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Clrn3Q8BHH8 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.17□□□□□ -2.22
Clrn3Q8BHH8 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Clrn3Q8BHH8 Gm23523-201ENSMUST00000180190 107 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms