Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 Gm23435-201ENSMUST00000157183 156 ntBASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 Gm22227-201ENSMUST00000157356 259 ntBASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 Gm21827-201ENSMUST00000178247 423 ntBASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 Gm44533-201ENSMUST00000207782 268 ntBASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 Gm44666-201ENSMUST00000208544 391 ntBASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 Gm23404-201ENSMUST00000082543 97 ntBASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 Mir322-201ENSMUST00000083484 95 ntBASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 Gm23731-201ENSMUST00000083749 107 ntBASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Atg4bQ8BGE6 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Gm22713-201ENSMUST00000116895 130 ntBASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Gm13432-201ENSMUST00000118861 241 ntBASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Gm3788-201ENSMUST00000119949 136 ntBASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Gm13729-201ENSMUST00000120328 406 ntBASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Gm25059-201ENSMUST00000157367 117 ntBASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Gm24480-201ENSMUST00000157442 103 ntBASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Gm24770-201ENSMUST00000158505 92 ntBASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Gm3724-201ENSMUST00000197957 349 ntBASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Gm25788-201ENSMUST00000082721 131 ntBASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Gm25929-201ENSMUST00000082784 107 ntBASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Mir29c-201ENSMUST00000083614 88 ntBASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.79□□□□□ -2.12
Atg4bQ8BGE6 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 Gm14980-201ENSMUST00000121247 736 ntBASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 Gm24837-201ENSMUST00000158683 81 ntBASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 Gm17161-201ENSMUST00000169187 524 ntBASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 Gm22264-201ENSMUST00000178200 107 ntBASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 Gm23793-201ENSMUST00000179396 117 ntBASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 Gm43865-201ENSMUST00000204721 127 ntBASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 Gm44811-201ENSMUST00000209120 228 ntBASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Atg4bQ8BGE6 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.13
Atg4bQ8BGE6 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Trav20-201ENSMUST00000142754 347 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Gm23120-201ENSMUST00000157654 287 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Gm24504-201ENSMUST00000157679 100 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Gm16038-201ENSMUST00000159317 193 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Mir6997-201ENSMUST00000184313 71 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Mir6950-201ENSMUST00000184438 73 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Gm28995-201ENSMUST00000186625 261 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Gm29229-201ENSMUST00000188874 323 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Gm44482-201ENSMUST00000199232 103 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Gm44010-201ENSMUST00000204432 331 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Gm44564-201ENSMUST00000207985 180 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Gm45386-201ENSMUST00000210194 218 ntBASIC1.77□□□□□ -2.13
Atg4bQ8BGE6 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm12235-201ENSMUST00000118596 170 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm11254-201ENSMUST00000122368 653 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm24896-201ENSMUST00000122741 135 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm26157-201ENSMUST00000158974 126 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm24487-201ENSMUST00000178017 63 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm27544-201ENSMUST00000185069 155 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm20257-202ENSMUST00000188643 130 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm43583-201ENSMUST00000199235 303 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm43884-201ENSMUST00000204251 559 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm44960-201ENSMUST00000207403 141 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Snord42a-201ENSMUST00000082606 65 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm25135-201ENSMUST00000082648 143 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm25813-201ENSMUST00000082748 191 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Gm26175-201ENSMUST00000083794 131 ntBASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Atg4bQ8BGE6 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Atg4bQ8BGE6 Gm26249-201ENSMUST00000116708 118 ntBASIC1.75□□□□□ -2.13
Atg4bQ8BGE6 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Atg4bQ8BGE6 Gm24348-201ENSMUST00000158710 130 ntBASIC1.75□□□□□ -2.13
Atg4bQ8BGE6 Gm24308-201ENSMUST00000177773 114 ntBASIC1.75□□□□□ -2.13
Atg4bQ8BGE6 Gm27878-201ENSMUST00000184000 106 ntBASIC1.75□□□□□ -2.13
Atg4bQ8BGE6 Gm27959-201ENSMUST00000185172 111 ntBASIC1.75□□□□□ -2.13
Atg4bQ8BGE6 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.75□□□□□ -2.13
Atg4bQ8BGE6 Gm29005-201ENSMUST00000186773 320 ntBASIC1.75□□□□□ -2.13
Atg4bQ8BGE6 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC1.75□□□□□ -2.13
Atg4bQ8BGE6 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.75□□□□□ -2.13
Atg4bQ8BGE6 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.75□□□□□ -2.13
Atg4bQ8BGE6 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.75□□□□□ -2.13
Atg4bQ8BGE6 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms