Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Gm14551-201ENSMUST00000120802 256 ntBASIC1.43□□□□□ -2.18
Trim17Q7TPM3 Gm23083-201ENSMUST00000157851 116 ntBASIC1.43□□□□□ -2.18
Trim17Q7TPM3 Gm23641-201ENSMUST00000157857 101 ntBASIC1.43□□□□□ -2.18
Trim17Q7TPM3 Gm24393-201ENSMUST00000158135 97 ntBASIC1.43□□□□□ -2.18
Trim17Q7TPM3 Gm21754-201ENSMUST00000177550 479 ntBASIC1.43□□□□□ -2.18
Trim17Q7TPM3 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trim17Q7TPM3 Gm29350-201ENSMUST00000189141 541 ntBASIC1.43□□□□□ -2.18
Trim17Q7TPM3 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.43□□□□□ -2.18
Trim17Q7TPM3 Gm43245-201ENSMUST00000197603 468 ntBASIC1.43□□□□□ -2.18
Trim17Q7TPM3 Gm43510-201ENSMUST00000197922 353 ntBASIC1.43□□□□□ -2.18
Trim17Q7TPM3 Gm44654-201ENSMUST00000208052 329 ntBASIC1.43□□□□□ -2.18
Trim17Q7TPM3 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.43□□□□□ -2.18
Trim17Q7TPM3 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.43□□□□□ -2.18
Trim17Q7TPM3 Mir452-201ENSMUST00000093629 85 ntBASIC1.43□□□□□ -2.18
Trim17Q7TPM3 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
Trim17Q7TPM3 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trim17Q7TPM3 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Gm22075-201ENSMUST00000158599 192 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Gm23340-201ENSMUST00000158955 123 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Gm17113-201ENSMUST00000170118 171 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Mir3057-201ENSMUST00000175040 91 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Gm23636-201ENSMUST00000175070 95 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Gm27660-201ENSMUST00000184028 208 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Gm38261-201ENSMUST00000192608 316 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Gm43723-201ENSMUST00000196886 189 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Gm18971-201ENSMUST00000197240 374 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Gm23093-201ENSMUST00000083450 102 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.42□□□□□ -2.18
Trim17Q7TPM3 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm24901-201ENSMUST00000158125 110 ntBASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm22537-201ENSMUST00000158172 199 ntBASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm22841-201ENSMUST00000158443 62 ntBASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm24229-201ENSMUST00000158830 118 ntBASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm22800-201ENSMUST00000175627 94 ntBASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm21064-202ENSMUST00000190583 278 ntBASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm37658-201ENSMUST00000192672 315 ntBASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm44482-201ENSMUST00000199232 103 ntBASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm18854-201ENSMUST00000211196 329 ntBASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm22577-201ENSMUST00000083731 109 ntBASIC1.41□□□□□ -2.18
Trim17Q7TPM3 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trim17Q7TPM3 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm24342-201ENSMUST00000103907 104 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm24079-201ENSMUST00000104352 132 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm25496-201ENSMUST00000104430 120 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm12225-201ENSMUST00000117995 298 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm14923-201ENSMUST00000118270 155 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm13153-201ENSMUST00000120969 637 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm23829-201ENSMUST00000157392 270 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm23586-201ENSMUST00000157657 123 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm23725-201ENSMUST00000177876 107 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Mir6388-201ENSMUST00000184417 75 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm28343-201ENSMUST00000185386 112 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm37361-201ENSMUST00000194345 132 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm42774-201ENSMUST00000198854 283 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm44336-201ENSMUST00000203696 468 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm17990-201ENSMUST00000211728 553 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm25859-201ENSMUST00000083710 91 ntBASIC1.4□□□□□ -2.19
Trim17Q7TPM3 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Gm8858-201ENSMUST00000118259 342 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Gm11835-201ENSMUST00000120635 663 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Gm26102-201ENSMUST00000157251 284 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Gm25044-201ENSMUST00000158603 104 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Gm23339-201ENSMUST00000158962 139 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Traj60-201ENSMUST00000167781 54 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Gm23523-201ENSMUST00000180190 107 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Gm27385-201ENSMUST00000184747 104 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Gm42506-201ENSMUST00000202009 150 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 AC108945.1-201ENSMUST00000226477 94 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Gm26493-201ENSMUST00000083155 136 ntBASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
Trim17Q7TPM3 Gm14293-201ENSMUST00000118528 577 ntBASIC1.38□□□□□ -2.19
Trim17Q7TPM3 Gm11606-201ENSMUST00000120706 617 ntBASIC1.38□□□□□ -2.19
Trim17Q7TPM3 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.38□□□□□ -2.19
Trim17Q7TPM3 Mir6985-201ENSMUST00000184641 61 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 218 ms