Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Snord33-201ENSMUST00000083694 84 ntBASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 Gm23042-201ENSMUST00000083866 101 ntBASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm25011-201ENSMUST00000158398 126 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28110-201ENSMUST00000185782 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28560-201ENSMUST00000186091 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm29057-201ENSMUST00000186468 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28334-201ENSMUST00000186653 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28737-201ENSMUST00000186808 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm29147-201ENSMUST00000186846 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm29118-201ENSMUST00000186908 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28433-201ENSMUST00000187085 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm29227-201ENSMUST00000187139 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28759-201ENSMUST00000187621 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28831-201ENSMUST00000187739 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm29034-201ENSMUST00000188099 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28752-201ENSMUST00000188340 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28495-201ENSMUST00000188452 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28474-201ENSMUST00000188501 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28232-201ENSMUST00000188683 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28569-201ENSMUST00000188748 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28120-201ENSMUST00000188812 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28369-201ENSMUST00000188993 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28537-201ENSMUST00000189026 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28481-201ENSMUST00000189231 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28861-201ENSMUST00000189681 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28717-201ENSMUST00000189950 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm29180-201ENSMUST00000190003 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm29575-201ENSMUST00000190597 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm29631-201ENSMUST00000191065 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm28160-201ENSMUST00000191229 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm29469-201ENSMUST00000191448 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm29059-201ENSMUST00000191534 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm37765-201ENSMUST00000192395 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm37658-201ENSMUST00000192672 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm37237-201ENSMUST00000192893 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm36968-201ENSMUST00000193737 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm38290-201ENSMUST00000195238 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm37129-201ENSMUST00000195791 315 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Mir191-201ENSMUST00000196210 74 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm44976-201ENSMUST00000205543 261 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm2829-201ENSMUST00000213121 499 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 AC140477.1-201ENSMUST00000222354 246 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm11351-202ENSMUST00000225724 478 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm22974-201ENSMUST00000083301 103 ntBASIC0.28□□□□□ -2.37
Topbp1Q6ZQF0 Gm24271-201ENSMUST00000102327 111 ntBASIC0.27□□□□□ -2.37
Topbp1Q6ZQF0 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Topbp1Q6ZQF0 Gm23206-201ENSMUST00000122720 184 ntBASIC0.27□□□□□ -2.37
Topbp1Q6ZQF0 Gm24480-201ENSMUST00000157442 103 ntBASIC0.27□□□□□ -2.37
Topbp1Q6ZQF0 Gm24668-201ENSMUST00000158935 104 ntBASIC0.27□□□□□ -2.37
Topbp1Q6ZQF0 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
Topbp1Q6ZQF0 Gm24969-201ENSMUST00000180331 79 ntBASIC0.27□□□□□ -2.37
Topbp1Q6ZQF0 Gm27402-201ENSMUST00000183890 120 ntBASIC0.27□□□□□ -2.37
Topbp1Q6ZQF0 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC0.27□□□□□ -2.37
Topbp1Q6ZQF0 Gm9156-201ENSMUST00000189660 463 ntBASIC0.27□□□□□ -2.37
Topbp1Q6ZQF0 Gm37693-201ENSMUST00000194562 234 ntBASIC0.27□□□□□ -2.37
Topbp1Q6ZQF0 Gm22796-201ENSMUST00000157234 106 ntBASIC0.26□□□□□ -2.37
Topbp1Q6ZQF0 Rnu7-201ENSMUST00000158458 62 ntBASIC0.26□□□□□ -2.37
Topbp1Q6ZQF0 Gm25772-201ENSMUST00000158574 56 ntBASIC0.26□□□□□ -2.37
Topbp1Q6ZQF0 Gm17377-201ENSMUST00000165184 207 ntBASIC0.26□□□□□ -2.37
Topbp1Q6ZQF0 Gm23645-201ENSMUST00000083228 108 ntBASIC0.26□□□□□ -2.37
Topbp1Q6ZQF0 Gm25378-201ENSMUST00000104333 129 ntBASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Gm44326-201ENSMUST00000198226 101 ntBASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Mir29b-2-201ENSMUST00000083478 81 ntBASIC0.25□□□□□ -2.37
Topbp1Q6ZQF0 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.24□□□□□ -2.37
Topbp1Q6ZQF0 Gm22757-201ENSMUST00000102279 96 ntBASIC0.24□□□□□ -2.37
Topbp1Q6ZQF0 Gm16186-201ENSMUST00000120132 216 ntBASIC0.24□□□□□ -2.37
Topbp1Q6ZQF0 Gm23586-201ENSMUST00000157657 123 ntBASIC0.24□□□□□ -2.37
Topbp1Q6ZQF0 Gm24963-201ENSMUST00000157916 144 ntBASIC0.24□□□□□ -2.37
Topbp1Q6ZQF0 Gm22962-201ENSMUST00000157962 73 ntBASIC0.24□□□□□ -2.37
Topbp1Q6ZQF0 Gm23114-201ENSMUST00000158478 117 ntBASIC0.24□□□□□ -2.37
Topbp1Q6ZQF0 Gm37319-201ENSMUST00000193500 636 ntBASIC0.24□□□□□ -2.37
Topbp1Q6ZQF0 Gm44345-201ENSMUST00000199560 135 ntBASIC0.24□□□□□ -2.37
Topbp1Q6ZQF0 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.24□□□□□ -2.37
Topbp1Q6ZQF0 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.24□□□□□ -2.37
Topbp1Q6ZQF0 Gm25876-201ENSMUST00000104329 119 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 Gm12806-201ENSMUST00000119384 268 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 Gm13396-201ENSMUST00000120617 271 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 Gm25325-201ENSMUST00000122559 86 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 Gm23761-201ENSMUST00000158347 104 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 Gm8114-201ENSMUST00000172225 484 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 Gm38149-201ENSMUST00000191943 339 ntBASIC0.23□□□□□ -2.37
Topbp1Q6ZQF0 Gm37089-201ENSMUST00000195616 129 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms