Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm24670-201ENSMUST00000104154 132 ntBASIC3.08□□□□□ -1.92
Ddx55Q6ZPL9 Gm25316-201ENSMUST00000116826 118 ntBASIC3.08□□□□□ -1.92
Ddx55Q6ZPL9 Gm22027-201ENSMUST00000122737 127 ntBASIC3.08□□□□□ -1.92
Ddx55Q6ZPL9 Gm37807-201ENSMUST00000194310 190 ntBASIC3.08□□□□□ -1.92
Ddx55Q6ZPL9 Mir376a-201ENSMUST00000197584 68 ntBASIC3.08□□□□□ -1.92
Ddx55Q6ZPL9 Gm44425-201ENSMUST00000203739 429 ntBASIC3.08□□□□□ -1.92
Ddx55Q6ZPL9 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.08□□□□□ -1.92
Ddx55Q6ZPL9 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.08□□□□□ -1.92
Ddx55Q6ZPL9 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.08□□□□□ -1.92
Ddx55Q6ZPL9 Gm23738-201ENSMUST00000082828 171 ntBASIC3.08□□□□□ -1.92
Ddx55Q6ZPL9 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.08□□□□□ -1.92
Ddx55Q6ZPL9 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
Ddx55Q6ZPL9 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ddx55Q6ZPL9 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ddx55Q6ZPL9 Gm24423-201ENSMUST00000101982 106 ntBASIC3.07□□□□□ -1.92
Ddx55Q6ZPL9 Gm22658-201ENSMUST00000104196 155 ntBASIC3.07□□□□□ -1.92
Ddx55Q6ZPL9 Mir881-201ENSMUST00000104844 78 ntBASIC3.07□□□□□ -1.92
Ddx55Q6ZPL9 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.07□□□□□ -1.92
Ddx55Q6ZPL9 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ddx55Q6ZPL9 Gm22321-201ENSMUST00000157152 104 ntBASIC3.07□□□□□ -1.92
Ddx55Q6ZPL9 Gm26186-201ENSMUST00000157689 125 ntBASIC3.07□□□□□ -1.92
Ddx55Q6ZPL9 Gm27545-201ENSMUST00000184755 202 ntBASIC3.07□□□□□ -1.92
Ddx55Q6ZPL9 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC3.07□□□□□ -1.92
Ddx55Q6ZPL9 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.07□□□□□ -1.92
Ddx55Q6ZPL9 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm22270-201ENSMUST00000104034 132 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm15282-201ENSMUST00000117707 300 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm6574-201ENSMUST00000120037 362 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm23889-201ENSMUST00000122689 104 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm25664-201ENSMUST00000157697 107 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm22382-201ENSMUST00000158185 130 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm26287-201ENSMUST00000158887 81 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm27220-201ENSMUST00000183453 262 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm27786-201ENSMUST00000184337 70 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm45879-201ENSMUST00000212521 392 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm25930-201ENSMUST00000082785 107 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ddx55Q6ZPL9 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 Gm14073-201ENSMUST00000117344 381 ntBASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 Gm15497-201ENSMUST00000119137 551 ntBASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 Gm8260-201ENSMUST00000119230 353 ntBASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 Gm29005-201ENSMUST00000186773 320 ntBASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 Mir465d-201ENSMUST00000196314 58 ntBASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.05□□□□□ -1.92
Ddx55Q6ZPL9 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.04□□□□□ -1.92
Ddx55Q6ZPL9 Gm16533-201ENSMUST00000140035 228 ntBASIC3.04□□□□□ -1.92
Ddx55Q6ZPL9 Gm7592-201ENSMUST00000160674 627 ntBASIC3.04□□□□□ -1.92
Ddx55Q6ZPL9 Gm7582-201ENSMUST00000160831 603 ntBASIC3.04□□□□□ -1.92
Ddx55Q6ZPL9 Gm25749-201ENSMUST00000175485 111 ntBASIC3.04□□□□□ -1.92
Ddx55Q6ZPL9 Gm20630-201ENSMUST00000177387 551 ntBASIC3.04□□□□□ -1.92
Ddx55Q6ZPL9 Gm24388-201ENSMUST00000177872 107 ntBASIC3.04□□□□□ -1.92
Ddx55Q6ZPL9 Gm27698-201ENSMUST00000184060 249 ntBASIC3.04□□□□□ -1.92
Ddx55Q6ZPL9 Gm42672-201ENSMUST00000197821 352 ntBASIC3.04□□□□□ -1.92
Ddx55Q6ZPL9 Gm45150-201ENSMUST00000206051 467 ntBASIC3.04□□□□□ -1.92
Ddx55Q6ZPL9 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC3.04□□□□□ -1.92
Ddx55Q6ZPL9 Gm23462-201ENSMUST00000083264 104 ntBASIC3.04□□□□□ -1.92
Ddx55Q6ZPL9 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Snord14c-201ENSMUST00000101927 86 ntBASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Gm14846-201ENSMUST00000121868 216 ntBASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Gm24892-201ENSMUST00000122747 104 ntBASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Gm23640-201ENSMUST00000157860 104 ntBASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Gm22651-201ENSMUST00000157872 94 ntBASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Mir6386-201ENSMUST00000183558 104 ntBASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Mir6399-201ENSMUST00000184050 84 ntBASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Gm27540-201ENSMUST00000184950 187 ntBASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Gm37746-201ENSMUST00000193249 198 ntBASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Gm44459-201ENSMUST00000203926 160 ntBASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Gm45288-201ENSMUST00000210236 151 ntBASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Gm45859-201ENSMUST00000212794 214 ntBASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ddx55Q6ZPL9 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms