Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm25059-201ENSMUST00000157367 117 ntBASIC2.76□□□□□ -1.97
Ddx58Q6Q899 Gm24475-201ENSMUST00000157435 143 ntBASIC2.76□□□□□ -1.97
Ddx58Q6Q899 Gm24010-201ENSMUST00000157731 282 ntBASIC2.76□□□□□ -1.97
Ddx58Q6Q899 Gm23921-201ENSMUST00000175258 107 ntBASIC2.76□□□□□ -1.97
Ddx58Q6Q899 Gm28257-201ENSMUST00000185244 463 ntBASIC2.76□□□□□ -1.97
Ddx58Q6Q899 Gm28288-201ENSMUST00000191019 214 ntBASIC2.76□□□□□ -1.97
Ddx58Q6Q899 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.76□□□□□ -1.97
Ddx58Q6Q899 Gm22685-201ENSMUST00000082848 106 ntBASIC2.76□□□□□ -1.97
Ddx58Q6Q899 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ddx58Q6Q899 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
Ddx58Q6Q899 Gm22713-201ENSMUST00000116895 130 ntBASIC2.75□□□□□ -1.97
Ddx58Q6Q899 Gm16584-201ENSMUST00000159267 189 ntBASIC2.75□□□□□ -1.97
Ddx58Q6Q899 Gm24308-201ENSMUST00000177773 114 ntBASIC2.75□□□□□ -1.97
Ddx58Q6Q899 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.75□□□□□ -1.97
Ddx58Q6Q899 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.75□□□□□ -1.97
Ddx58Q6Q899 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.75□□□□□ -1.97
Ddx58Q6Q899 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.75□□□□□ -1.97
Ddx58Q6Q899 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.75□□□□□ -1.97
Ddx58Q6Q899 Gm26126-201ENSMUST00000083188 164 ntBASIC2.75□□□□□ -1.97
Ddx58Q6Q899 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.74□□□□□ -1.97
Ddx58Q6Q899 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Gm24049-201ENSMUST00000102409 100 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Gm14894-201ENSMUST00000117170 270 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Gm11935-201ENSMUST00000118608 399 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Gm11254-201ENSMUST00000122368 653 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Gm22447-201ENSMUST00000158155 92 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Gm22159-201ENSMUST00000158412 130 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Gm22947-201ENSMUST00000158559 91 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Gm27991-201ENSMUST00000184804 137 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Gm37449-201ENSMUST00000193016 270 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Gm18658-201ENSMUST00000195558 270 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Gm43722-201ENSMUST00000196054 124 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ddx58Q6Q899 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.74□□□□□ -1.97
Ddx58Q6Q899 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Gm13432-201ENSMUST00000118861 241 ntBASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Gm24480-201ENSMUST00000157442 103 ntBASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Mir5624-201ENSMUST00000176635 61 ntBASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Gm28016-201ENSMUST00000184594 196 ntBASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Mir6376-201ENSMUST00000185149 131 ntBASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Gm44468-201ENSMUST00000199516 105 ntBASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Gm44666-201ENSMUST00000208544 391 ntBASIC2.73□□□□□ -1.97
Ddx58Q6Q899 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Gm25589-201ENSMUST00000082502 166 ntBASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Gm26329-201ENSMUST00000093723 110 ntBASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.73□□□□□ -1.97
Ddx58Q6Q899 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Ddx58Q6Q899 Mir669d-201ENSMUST00000104644 121 ntBASIC2.72□□□□□ -1.97
Ddx58Q6Q899 Mir669i-201ENSMUST00000117007 127 ntBASIC2.72□□□□□ -1.97
Ddx58Q6Q899 Gm22598-201ENSMUST00000157600 127 ntBASIC2.72□□□□□ -1.97
Ddx58Q6Q899 Gm24053-201ENSMUST00000158620 105 ntBASIC2.72□□□□□ -1.97
Ddx58Q6Q899 Gm24573-201ENSMUST00000175499 112 ntBASIC2.72□□□□□ -1.97
Ddx58Q6Q899 Gm19777-201ENSMUST00000191940 358 ntBASIC2.72□□□□□ -1.97
Ddx58Q6Q899 Gm44320-201ENSMUST00000199276 86 ntBASIC2.72□□□□□ -1.97
Ddx58Q6Q899 Gm44564-201ENSMUST00000207985 180 ntBASIC2.72□□□□□ -1.97
Ddx58Q6Q899 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.72□□□□□ -1.97
Ddx58Q6Q899 AC116460.1-201ENSMUST00000219040 313 ntBASIC2.72□□□□□ -1.97
Ddx58Q6Q899 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.72□□□□□ -1.97
Ddx58Q6Q899 Mir32-201ENSMUST00000083610 70 ntBASIC2.72□□□□□ -1.97
Ddx58Q6Q899 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.72□□□□□ -1.97
Ddx58Q6Q899 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Ddx58Q6Q899 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
Ddx58Q6Q899 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm26280-201ENSMUST00000157096 101 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm24900-201ENSMUST00000158128 134 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm23262-201ENSMUST00000158323 168 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm24769-201ENSMUST00000158506 129 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm22093-201ENSMUST00000158980 111 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm24618-201ENSMUST00000177718 94 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm22264-201ENSMUST00000178200 107 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm23953-201ENSMUST00000178214 94 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm26332-201ENSMUST00000179813 94 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm22863-201ENSMUST00000180265 94 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm43676-201ENSMUST00000197532 540 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm42807-201ENSMUST00000200141 329 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm22978-201ENSMUST00000082607 160 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Gm24661-201ENSMUST00000083205 104 ntBASIC2.71□□□□□ -1.98
Ddx58Q6Q899 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Ddx58Q6Q899 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Gm14298-201ENSMUST00000139032 237 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Gm16356-201ENSMUST00000143300 169 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Gm25711-201ENSMUST00000158633 128 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Gm25996-201ENSMUST00000175393 117 ntBASIC2.7□□□□□ -1.98
Ddx58Q6Q899 Gm20613-201ENSMUST00000175828 345 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms