Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm11935-201ENSMUST00000118608 399 ntBASIC2.56□□□□□ -2
Smarca1Q6PGB8 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.56□□□□□ -2
Smarca1Q6PGB8 Gm25961-201ENSMUST00000157174 135 ntBASIC2.56□□□□□ -2
Smarca1Q6PGB8 Gm22099-201ENSMUST00000157925 123 ntBASIC2.56□□□□□ -2
Smarca1Q6PGB8 Gm24308-201ENSMUST00000177773 114 ntBASIC2.56□□□□□ -2
Smarca1Q6PGB8 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.56□□□□□ -2
Smarca1Q6PGB8 Gm45673-201ENSMUST00000210293 358 ntBASIC2.56□□□□□ -2
Smarca1Q6PGB8 Gm18617-201ENSMUST00000222311 259 ntBASIC2.56□□□□□ -2
Smarca1Q6PGB8 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.56□□□□□ -2
Smarca1Q6PGB8 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.56□□□□□ -2
Smarca1Q6PGB8 Gm24313-201ENSMUST00000082561 133 ntBASIC2.56□□□□□ -2
Smarca1Q6PGB8 Gm24661-201ENSMUST00000083205 104 ntBASIC2.56□□□□□ -2
Smarca1Q6PGB8 Gm26329-201ENSMUST00000093723 110 ntBASIC2.56□□□□□ -2
Smarca1Q6PGB8 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.56□□□□□ -2
Smarca1Q6PGB8 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Smarca1Q6PGB8 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Smarca1Q6PGB8 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Smarca1Q6PGB8 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Gm13913-201ENSMUST00000121126 260 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Gm12785-201ENSMUST00000122052 172 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Gm25910-201ENSMUST00000157620 140 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Gm23262-201ENSMUST00000158323 168 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Gm23921-201ENSMUST00000175258 107 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Mir28b-201ENSMUST00000175399 80 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Gm28016-201ENSMUST00000184594 196 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Gm37338-201ENSMUST00000191986 127 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Gm26379-202ENSMUST00000200225 132 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Gm44083-201ENSMUST00000203114 337 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Gm45791-201ENSMUST00000212908 352 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.55□□□□□ -2
Smarca1Q6PGB8 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Smarca1Q6PGB8 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.55□□□□□ -2
Smarca1Q6PGB8 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Smarca1Q6PGB8 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.55□□□□□ -2
Smarca1Q6PGB8 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Smarca1Q6PGB8 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Smarca1Q6PGB8 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.54□□□□□ -2
Smarca1Q6PGB8 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm22447-201ENSMUST00000158155 92 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Smarca1Q6PGB8 Mir7009-201ENSMUST00000184519 64 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm27640-201ENSMUST00000184580 147 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm29005-201ENSMUST00000186773 320 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm44468-201ENSMUST00000199516 105 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm44794-201ENSMUST00000206550 411 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm44564-201ENSMUST00000207985 180 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm44666-201ENSMUST00000208544 391 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm25130-201ENSMUST00000082650 156 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm25124-201ENSMUST00000083345 164 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.54□□□□□ -2
Smarca1Q6PGB8 Gm23011-201ENSMUST00000104148 132 ntBASIC2.53□□□□□ -2
Smarca1Q6PGB8 Gm26249-201ENSMUST00000116708 118 ntBASIC2.53□□□□□ -2
Smarca1Q6PGB8 Gm14803-201ENSMUST00000117163 361 ntBASIC2.53□□□□□ -2
Smarca1Q6PGB8 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.53□□□□□ -2
Smarca1Q6PGB8 Gm22434-201ENSMUST00000158549 122 ntBASIC2.53□□□□□ -2
Smarca1Q6PGB8 Gm22945-201ENSMUST00000158557 157 ntBASIC2.53□□□□□ -2
Smarca1Q6PGB8 Gm16561-201ENSMUST00000163001 192 ntBASIC2.53□□□□□ -2
Smarca1Q6PGB8 Gm25996-201ENSMUST00000175393 117 ntBASIC2.53□□□□□ -2
Smarca1Q6PGB8 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.53□□□□□ -2
Smarca1Q6PGB8 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.53□□□□□ -2
Smarca1Q6PGB8 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Smarca1Q6PGB8 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.53□□□□□ -2
Smarca1Q6PGB8 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.53□□□□□ -2
Smarca1Q6PGB8 Gm24152-201ENSMUST00000082764 163 ntBASIC2.53□□□□□ -2
Smarca1Q6PGB8 Gm26111-201ENSMUST00000083969 106 ntBASIC2.53□□□□□ -2
Smarca1Q6PGB8 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.53□□□□□ -2
Smarca1Q6PGB8 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Smarca1Q6PGB8 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2.01
Smarca1Q6PGB8 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.53□□□□□ -2.01
Smarca1Q6PGB8 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 Mir344e-201ENSMUST00000104677 66 ntBASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 Gm12956-201ENSMUST00000122184 414 ntBASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 Mir1927-201ENSMUST00000158579 109 ntBASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 Gm24618-201ENSMUST00000177718 94 ntBASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 Gm23953-201ENSMUST00000178214 94 ntBASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 Gm26332-201ENSMUST00000179813 94 ntBASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 Gm22863-201ENSMUST00000180265 94 ntBASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 Mir6905-201ENSMUST00000184228 70 ntBASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 Gm43583-201ENSMUST00000199235 303 ntBASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 Gm45207-201ENSMUST00000207469 145 ntBASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.52□□□□□ -2.01
Smarca1Q6PGB8 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.51□□□□□ -2.01
Smarca1Q6PGB8 Gm12351-201ENSMUST00000118727 292 ntBASIC2.51□□□□□ -2.01
Smarca1Q6PGB8 Gm24896-201ENSMUST00000122741 135 ntBASIC2.51□□□□□ -2.01
Smarca1Q6PGB8 Gm17065-201ENSMUST00000165245 239 ntBASIC2.51□□□□□ -2.01
Smarca1Q6PGB8 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Smarca1Q6PGB8 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.51□□□□□ -2.01
Smarca1Q6PGB8 Mir7232-201ENSMUST00000197929 74 ntBASIC2.51□□□□□ -2.01
Smarca1Q6PGB8 Gm43587-201ENSMUST00000199590 204 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 209.4 ms