Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm22242-201ENSMUST00000175224 118 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Gm9830-201ENSMUST00000178509 357 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Gm25933-201ENSMUST00000178943 108 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Gm27410-201ENSMUST00000183851 115 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Gm37557-201ENSMUST00000191640 139 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Gm42570-201ENSMUST00000195937 292 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Gm23378-201ENSMUST00000082942 107 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Gm23970-201ENSMUST00000083319 107 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Mir181a-2-201ENSMUST00000083489 76 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
Snrnp40Q6PE01 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
Snrnp40Q6PE01 Gm25377-201ENSMUST00000104334 129 ntBASIC2.08□□□□□ -2.08
Snrnp40Q6PE01 Gm15010-201ENSMUST00000117153 407 ntBASIC2.08□□□□□ -2.08
Snrnp40Q6PE01 Gm12785-201ENSMUST00000122052 172 ntBASIC2.08□□□□□ -2.08
Snrnp40Q6PE01 Gm24177-201ENSMUST00000158927 131 ntBASIC2.08□□□□□ -2.08
Snrnp40Q6PE01 Gm25284-201ENSMUST00000180345 141 ntBASIC2.08□□□□□ -2.08
Snrnp40Q6PE01 Gm19257-201ENSMUST00000186121 183 ntBASIC2.08□□□□□ -2.08
Snrnp40Q6PE01 Gm44083-201ENSMUST00000203114 337 ntBASIC2.08□□□□□ -2.08
Snrnp40Q6PE01 Gm44564-201ENSMUST00000207985 180 ntBASIC2.08□□□□□ -2.08
Snrnp40Q6PE01 Gm45386-201ENSMUST00000210194 218 ntBASIC2.08□□□□□ -2.08
Snrnp40Q6PE01 Gm7214-201ENSMUST00000222428 272 ntBASIC2.08□□□□□ -2.08
Snrnp40Q6PE01 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.08□□□□□ -2.08
Snrnp40Q6PE01 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Snrnp40Q6PE01 Gm14748-201ENSMUST00000119819 411 ntBASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Gm11606-201ENSMUST00000120706 617 ntBASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Gm23779-201ENSMUST00000157938 64 ntBASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Gm22308-201ENSMUST00000177609 107 ntBASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Gm44373-201ENSMUST00000196112 169 ntBASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Gm45150-201ENSMUST00000206051 467 ntBASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Gm44794-201ENSMUST00000206550 411 ntBASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Gm44666-201ENSMUST00000208544 391 ntBASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Gm22997-201ENSMUST00000082845 107 ntBASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Snrnp40Q6PE01 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Gm11285-201ENSMUST00000118443 322 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Gm14761-201ENSMUST00000121363 262 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Gm15365-201ENSMUST00000122392 300 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Gm22945-201ENSMUST00000158557 157 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Gm24837-201ENSMUST00000158683 81 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Mir5624-201ENSMUST00000176635 61 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Gm24487-201ENSMUST00000178017 63 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Gm42672-201ENSMUST00000197821 352 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Gm43583-201ENSMUST00000199235 303 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Gm26126-201ENSMUST00000083188 164 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Mir93-201ENSMUST00000083593 88 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Mir29c-201ENSMUST00000083614 88 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Snrnp40Q6PE01 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Gm23599-201ENSMUST00000157261 251 ntBASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Gm23324-201ENSMUST00000157421 131 ntBASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Gm24475-201ENSMUST00000157435 143 ntBASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Gm22216-201ENSMUST00000157557 114 ntBASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Gm23120-201ENSMUST00000157654 287 ntBASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Gm25121-201ENSMUST00000179846 79 ntBASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Mir6353-201ENSMUST00000183596 113 ntBASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Mir6346-201ENSMUST00000183982 81 ntBASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Mir6399-201ENSMUST00000184050 84 ntBASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Gm28995-201ENSMUST00000186625 261 ntBASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Gm24764-201ENSMUST00000083686 199 ntBASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Snrnp40Q6PE01 Gm24282-201ENSMUST00000104232 66 ntBASIC2.04□□□□□ -2.08
Snrnp40Q6PE01 Gm24573-201ENSMUST00000175499 112 ntBASIC2.04□□□□□ -2.08
Snrnp40Q6PE01 Gm24618-201ENSMUST00000177718 94 ntBASIC2.04□□□□□ -2.08
Snrnp40Q6PE01 Gm23953-201ENSMUST00000178214 94 ntBASIC2.04□□□□□ -2.08
Snrnp40Q6PE01 Gm26332-201ENSMUST00000179813 94 ntBASIC2.04□□□□□ -2.08
Snrnp40Q6PE01 Gm22863-201ENSMUST00000180265 94 ntBASIC2.04□□□□□ -2.08
Snrnp40Q6PE01 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.04□□□□□ -2.08
Snrnp40Q6PE01 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.04□□□□□ -2.08
Snrnp40Q6PE01 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.04□□□□□ -2.08
Snrnp40Q6PE01 Gm24460-201ENSMUST00000082731 106 ntBASIC2.04□□□□□ -2.08
Snrnp40Q6PE01 Gm23412-201ENSMUST00000083017 107 ntBASIC2.04□□□□□ -2.08
Snrnp40Q6PE01 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.04□□□□□ -2.08
Snrnp40Q6PE01 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.04□□□□□ -2.08
Snrnp40Q6PE01 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 132.1 ms