Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm24948-201ENSMUST00000082866 207 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Mir92-2-201ENSMUST00000083679 91 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm26108-201ENSMUST00000083973 191 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm23130-201ENSMUST00000104252 74 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm13731-201ENSMUST00000117332 196 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm13378-201ENSMUST00000117483 336 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm22960-201ENSMUST00000122517 104 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
Col7a1Q63870 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm29613-201ENSMUST00000185846 313 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm29544-201ENSMUST00000188860 313 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm28808-201ENSMUST00000190978 313 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm43171-201ENSMUST00000199882 291 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC-0.05□□□□□ -2.42
Col7a1Q63870 AC138667.2-201ENSMUST00000224880 598 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC-0.05□□□□□ -2.42
Col7a1Q63870 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm19428-201ENSMUST00000220512 1995 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Mir599-201ENSMUST00000102378 88 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm24079-201ENSMUST00000104352 132 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm22019-201ENSMUST00000104359 96 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 n-R5s63-201ENSMUST00000122756 103 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm25663-201ENSMUST00000157698 135 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm22765-201ENSMUST00000158371 128 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm25952-201ENSMUST00000175329 74 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm43124-201ENSMUST00000201878 278 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC-0.05□□□□□ -2.42
Col7a1Q63870 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Col7a1Q63870 Mir19b-2-201ENSMUST00000083539 84 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm26166-201ENSMUST00000083788 107 ntBASIC-0.05□□□□□ -2.42
Col7a1Q63870 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
Col7a1Q63870 Gm22779-201ENSMUST00000104085 107 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm14629-201ENSMUST00000122428 144 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm14903-201ENSMUST00000122435 537 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm25318-201ENSMUST00000122554 314 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm22527-201ENSMUST00000158816 106 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm23419-201ENSMUST00000175523 84 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm25525-201ENSMUST00000177701 107 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm27599-201ENSMUST00000183758 174 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm38109-201ENSMUST00000195386 181 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 AC132104.1-201ENSMUST00000213615 260 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 AC162931.1-201ENSMUST00000214184 267 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 AC167202.1-201ENSMUST00000219027 331 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm24356-201ENSMUST00000082859 106 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm26206-201ENSMUST00000082908 110 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm22971-201ENSMUST00000083305 97 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm24764-201ENSMUST00000083686 199 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC-0.06□□□□□ -2.42
Col7a1Q63870 AC124426.1-203ENSMUST00000221814 1362 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm15177-201ENSMUST00000120491 577 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm24598-201ENSMUST00000122510 74 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm23523-201ENSMUST00000180190 107 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm5001-201ENSMUST00000204361 331 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm45701-201ENSMUST00000212049 235 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 AL669916.3-201ENSMUST00000213855 94 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 AL669916.6-201ENSMUST00000214610 94 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 AL669916.4-201ENSMUST00000215976 94 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 AL669916.1-201ENSMUST00000217640 94 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 AC159380.1-201ENSMUST00000218096 121 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 CT009733.1-201ENSMUST00000225322 425 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm9795-201ENSMUST00000062156 693 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm23627-201ENSMUST00000082459 107 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Snora20-201ENSMUST00000082703 128 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Mir18-201ENSMUST00000083469 96 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.06□□□□□ -2.42
Col7a1Q63870 Gm11252-201ENSMUST00000120572 939 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm11384-201ENSMUST00000121376 303 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm22796-201ENSMUST00000157234 106 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm24846-201ENSMUST00000158033 108 ntBASIC-0.07□□□□□ -2.42
Col7a1Q63870 Gm25905-201ENSMUST00000158490 101 ntBASIC-0.07□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms