Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trim27Q62158 Gm24907-201ENSMUST00000116932 128 ntBASIC2.26□□□□□ -2.05
Trim27Q62158 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.26□□□□□ -2.05
Trim27Q62158 Gm14972-201ENSMUST00000121780 364 ntBASIC2.26□□□□□ -2.05
Trim27Q62158 Gm23983-201ENSMUST00000157142 114 ntBASIC2.26□□□□□ -2.05
Trim27Q62158 Gm17100-201ENSMUST00000168963 272 ntBASIC2.26□□□□□ -2.05
Trim27Q62158 Gm24656-201ENSMUST00000177548 132 ntBASIC2.26□□□□□ -2.05
Trim27Q62158 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.26□□□□□ -2.05
Trim27Q62158 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.26□□□□□ -2.05
Trim27Q62158 Mir3961-201ENSMUST00000198795 59 ntBASIC2.26□□□□□ -2.05
Trim27Q62158 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.26□□□□□ -2.05
Trim27Q62158 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.26□□□□□ -2.05
Trim27Q62158 Gm23951-201ENSMUST00000104029 132 ntBASIC2.25□□□□□ -2.05
Trim27Q62158 Gm10105-201ENSMUST00000184601 270 ntBASIC2.25□□□□□ -2.05
Trim27Q62158 Gm28995-201ENSMUST00000186625 261 ntBASIC2.25□□□□□ -2.05
Trim27Q62158 Gm37399-201ENSMUST00000195224 416 ntBASIC2.25□□□□□ -2.05
Trim27Q62158 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC2.25□□□□□ -2.05
Trim27Q62158 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.25□□□□□ -2.05
Trim27Q62158 Snord43-201ENSMUST00000199549 108 ntBASIC2.25□□□□□ -2.05
Trim27Q62158 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.25□□□□□ -2.05
Trim27Q62158 Gm44010-201ENSMUST00000204432 331 ntBASIC2.25□□□□□ -2.05
Trim27Q62158 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.25□□□□□ -2.05
Trim27Q62158 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Trim27Q62158 Mir466f-3-201ENSMUST00000104788 94 ntBASIC2.24□□□□□ -2.05
Trim27Q62158 Gm13396-201ENSMUST00000120617 271 ntBASIC2.24□□□□□ -2.05
Trim27Q62158 Gm25543-201ENSMUST00000122678 312 ntBASIC2.24□□□□□ -2.05
Trim27Q62158 Gm7953-201ENSMUST00000168278 469 ntBASIC2.24□□□□□ -2.05
Trim27Q62158 Gm23813-201ENSMUST00000175153 77 ntBASIC2.24□□□□□ -2.05
Trim27Q62158 Mir6997-201ENSMUST00000184313 71 ntBASIC2.24□□□□□ -2.05
Trim27Q62158 Gm29397-201ENSMUST00000185205 333 ntBASIC2.24□□□□□ -2.05
Trim27Q62158 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trim27Q62158 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Trim27Q62158 Gm29005-201ENSMUST00000186773 320 ntBASIC2.24□□□□□ -2.05
Trim27Q62158 Mir1291-201ENSMUST00000199842 117 ntBASIC2.24□□□□□ -2.05
Trim27Q62158 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.24□□□□□ -2.05
Trim27Q62158 Snora34-201ENSMUST00000083402 138 ntBASIC2.24□□□□□ -2.05
Trim27Q62158 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Trim27Q62158 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Trim27Q62158 Gm14296-202ENSMUST00000108931 750 ntBASIC2.23□□□□□ -2.05
Trim27Q62158 Gm12926-201ENSMUST00000121158 409 ntBASIC2.23□□□□□ -2.05
Trim27Q62158 Gm23858-201ENSMUST00000158384 106 ntBASIC2.23□□□□□ -2.05
Trim27Q62158 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.23□□□□□ -2.05
Trim27Q62158 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.23□□□□□ -2.05
Trim27Q62158 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.23□□□□□ -2.05
Trim27Q62158 Gm27722-201ENSMUST00000183908 76 ntBASIC2.23□□□□□ -2.05
Trim27Q62158 Gm18357-201ENSMUST00000188184 580 ntBASIC2.23□□□□□ -2.05
Trim27Q62158 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.23□□□□□ -2.05
Trim27Q62158 Gm18291-201ENSMUST00000190791 301 ntBASIC2.23□□□□□ -2.05
Trim27Q62158 Gm38050-201ENSMUST00000191904 238 ntBASIC2.23□□□□□ -2.05
Trim27Q62158 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.23□□□□□ -2.05
Trim27Q62158 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.23□□□□□ -2.05
Trim27Q62158 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Trim27Q62158 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.23□□□□□ -2.05
Trim27Q62158 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.23□□□□□ -2.05
Trim27Q62158 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.23□□□□□ -2.05
Trim27Q62158 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.23□□□□□ -2.05
Trim27Q62158 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 Gm24984-201ENSMUST00000104454 133 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 Gm13432-201ENSMUST00000118861 241 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 Gm6444-201ENSMUST00000119611 458 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 Gm6956-201ENSMUST00000134724 546 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 Mir3086-201ENSMUST00000175072 87 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 Gm24799-201ENSMUST00000178431 79 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 Mir7226-201ENSMUST00000184953 60 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 Mir7678-201ENSMUST00000185076 71 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trim27Q62158 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 Gm30155-201ENSMUST00000223458 339 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 Gm24977-201ENSMUST00000083106 163 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Trim27Q62158 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.22□□□□□ -2.05
Trim27Q62158 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
Trim27Q62158 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trim27Q62158 Gm22494-201ENSMUST00000104495 128 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 Mir872-201ENSMUST00000104728 81 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Trim27Q62158 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Trim27Q62158 Gm12351-201ENSMUST00000118727 292 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 Gm11798-201ENSMUST00000119150 421 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 Gm13588-201ENSMUST00000120026 135 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 Gm11254-201ENSMUST00000122368 653 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 Gm24770-201ENSMUST00000158505 92 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 Gm16038-201ENSMUST00000159317 193 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.21□□□□□ -2.06
Trim27Q62158 Gm38041-201ENSMUST00000194445 661 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.21□□□□□ -2.06
Trim27Q62158 Gm43865-201ENSMUST00000204721 127 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 Gm25402-201ENSMUST00000082966 131 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 Mir151-201ENSMUST00000083678 68 ntBASIC2.21□□□□□ -2.06
Trim27Q62158 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Trim27Q62158 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trim27Q62158 Gm25421-201ENSMUST00000104218 164 ntBASIC2.2□□□□□ -2.06
Trim27Q62158 Gm25113-201ENSMUST00000157185 143 ntBASIC2.2□□□□□ -2.06
Trim27Q62158 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Trim27Q62158 Gm26200-201ENSMUST00000180273 79 ntBASIC2.2□□□□□ -2.06
Trim27Q62158 Mir3569-201ENSMUST00000185080 58 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms