Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm6956-201ENSMUST00000134724 546 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Gm23083-201ENSMUST00000157851 116 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Gm22663-201ENSMUST00000158721 102 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Gm23523-201ENSMUST00000180190 107 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Gm27711-201ENSMUST00000183802 118 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Mir7063-201ENSMUST00000184158 91 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Mir6388-201ENSMUST00000184417 75 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Gm29397-201ENSMUST00000185205 333 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Gm28437-201ENSMUST00000190277 783 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Trbv22-201ENSMUST00000191697 291 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Gm18296-201ENSMUST00000192475 783 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Vsx2Q61412 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.18□□□□□ -2.22
Vsx2Q61412 Mir6962-201ENSMUST00000199512 63 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.18□□□□□ -2.22
Vsx2Q61412 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.18□□□□□ -2.22
Vsx2Q61412 Gm45907-201ENSMUST00000213023 193 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Mir221-201ENSMUST00000083488 95 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Gm25409-201ENSMUST00000083764 131 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.18□□□□□ -2.22
Vsx2Q61412 Mir343-201ENSMUST00000102360 75 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm25759-201ENSMUST00000103988 129 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm23907-201ENSMUST00000104595 189 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm22193-201ENSMUST00000116868 76 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm14355-201ENSMUST00000117352 264 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm15443-201ENSMUST00000118947 820 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm14364-201ENSMUST00000129209 267 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm24229-201ENSMUST00000158830 118 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm25956-201ENSMUST00000175115 217 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm22166-201ENSMUST00000178419 121 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm23288-201ENSMUST00000179213 121 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm27385-201ENSMUST00000184747 104 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm38261-201ENSMUST00000192608 316 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm42774-201ENSMUST00000198854 283 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Mir1291-201ENSMUST00000199842 117 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm43911-201ENSMUST00000203097 76 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm44446-201ENSMUST00000204864 255 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm44655-201ENSMUST00000207768 423 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Vsx2Q61412 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm24623-201ENSMUST00000082616 194 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Snora34-201ENSMUST00000083402 138 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Mir410-201ENSMUST00000083563 81 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Snord38a-201ENSMUST00000083746 71 ntBASIC1.17□□□□□ -2.22
Vsx2Q61412 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Vsx2Q61412 Gm23212-201ENSMUST00000122718 60 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm26278-201ENSMUST00000157098 132 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm25914-201ENSMUST00000157618 153 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm25384-201ENSMUST00000157807 105 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm23854-201ENSMUST00000158378 108 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm16038-201ENSMUST00000159317 193 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.16□□□□□ -2.22
Vsx2Q61412 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm21754-201ENSMUST00000177550 479 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm26501-201ENSMUST00000178307 107 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Vsx2Q61412 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm29352-201ENSMUST00000188054 544 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm34073-201ENSMUST00000195736 212 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Gm35736-201ENSMUST00000203681 313 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.16□□□□□ -2.22
Vsx2Q61412 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.16□□□□□ -2.22
Vsx2Q61412 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Vsx2Q61412 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm22654-201ENSMUST00000157874 105 ntBASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm22485-201ENSMUST00000157990 109 ntBASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm24851-201ENSMUST00000158028 103 ntBASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm26405-201ENSMUST00000158495 100 ntBASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm24390-201ENSMUST00000179578 62 ntBASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Vsx2Q61412 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm38280-201ENSMUST00000192610 158 ntBASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm44282-201ENSMUST00000203199 190 ntBASIC1.15□□□□□ -2.23
Vsx2Q61412 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm23448-201ENSMUST00000083151 104 ntBASIC1.15□□□□□ -2.23
Vsx2Q61412 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.15□□□□□ -2.23
Vsx2Q61412 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
Vsx2Q61412 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.14□□□□□ -2.23
Vsx2Q61412 Gm25068-201ENSMUST00000103895 110 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 96.4 ms