Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Mir466c-1-201ENSMUST00000200654 84 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Gm8031-201ENSMUST00000213430 626 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Ift88Q61371 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
Ift88Q61371 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ift88Q61371 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Ift88Q61371 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.74□□□□□ -1.97
Ift88Q61371 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Ift88Q61371 Gm24116-201ENSMUST00000103975 107 ntBASIC2.74□□□□□ -1.97
Ift88Q61371 Gm14774-201ENSMUST00000117857 536 ntBASIC2.74□□□□□ -1.97
Ift88Q61371 Gm13880-201ENSMUST00000118421 474 ntBASIC2.74□□□□□ -1.97
Ift88Q61371 Gm14602-201ENSMUST00000118625 340 ntBASIC2.74□□□□□ -1.97
Ift88Q61371 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.74□□□□□ -1.97
Ift88Q61371 Gm23865-201ENSMUST00000157723 97 ntBASIC2.74□□□□□ -1.97
Ift88Q61371 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.74□□□□□ -1.97
Ift88Q61371 Gm27271-201ENSMUST00000183509 170 ntBASIC2.74□□□□□ -1.97
Ift88Q61371 Gm28849-201ENSMUST00000188127 174 ntBASIC2.74□□□□□ -1.97
Ift88Q61371 Gm28330-201ENSMUST00000190353 171 ntBASIC2.74□□□□□ -1.97
Ift88Q61371 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC2.74□□□□□ -1.97
Ift88Q61371 Gm25930-201ENSMUST00000082785 107 ntBASIC2.74□□□□□ -1.97
Ift88Q61371 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.74□□□□□ -1.97
Ift88Q61371 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.74□□□□□ -1.97
Ift88Q61371 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Ift88Q61371 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ift88Q61371 Gm22678-201ENSMUST00000116974 101 ntBASIC2.73□□□□□ -1.97
Ift88Q61371 Gm14215-201ENSMUST00000120578 221 ntBASIC2.73□□□□□ -1.97
Ift88Q61371 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.73□□□□□ -1.97
Ift88Q61371 Gm22215-201ENSMUST00000157558 96 ntBASIC2.73□□□□□ -1.97
Ift88Q61371 Gm44223-201ENSMUST00000204854 114 ntBASIC2.73□□□□□ -1.97
Ift88Q61371 Gm44478-201ENSMUST00000204875 114 ntBASIC2.73□□□□□ -1.97
Ift88Q61371 AC165157.3-201ENSMUST00000220815 103 ntBASIC2.73□□□□□ -1.97
Ift88Q61371 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.73□□□□□ -1.97
Ift88Q61371 Mir193a-201ENSMUST00000083461 66 ntBASIC2.73□□□□□ -1.97
Ift88Q61371 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ift88Q61371 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Ift88Q61371 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Ift88Q61371 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Ift88Q61371 Mir878-201ENSMUST00000104680 78 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Gm15215-201ENSMUST00000117773 489 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Gm22984-201ENSMUST00000122751 122 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Gm26105-201ENSMUST00000157253 190 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Gm25392-201ENSMUST00000157335 297 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Gm22537-201ENSMUST00000158172 199 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Gm24212-201ENSMUST00000158258 132 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Gm6788-201ENSMUST00000166459 270 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Gm24818-201ENSMUST00000175093 161 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Gm3852-201ENSMUST00000182781 264 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Gm28314-201ENSMUST00000191276 345 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Ift88Q61371 Gm43264-201ENSMUST00000202284 325 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Gm45365-201ENSMUST00000209489 256 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.72□□□□□ -1.97
Ift88Q61371 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.72□□□□□ -1.97
Ift88Q61371 Gm22486-201ENSMUST00000116815 137 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Gm12351-201ENSMUST00000118727 292 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Gm6829-201ENSMUST00000119858 360 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Gm13862-201ENSMUST00000121220 197 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Gm26186-201ENSMUST00000157689 125 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Gm23542-201ENSMUST00000158208 96 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Gm17067-202ENSMUST00000180131 123 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Mir6386-201ENSMUST00000183558 104 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Gm27402-201ENSMUST00000183890 120 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Gm37104-201ENSMUST00000193278 196 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.71□□□□□ -1.98
Ift88Q61371 Gm42578-201ENSMUST00000199960 194 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Gm9795-201ENSMUST00000062156 693 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Gm25589-201ENSMUST00000082502 166 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Ift88Q61371 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.71□□□□□ -1.98
Ift88Q61371 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ift88Q61371 Gm24127-201ENSMUST00000104110 130 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 Gm25059-201ENSMUST00000157367 117 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 Gm25476-201ENSMUST00000175125 185 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 Gm26426-201ENSMUST00000177866 123 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 Gm26060-201ENSMUST00000180094 123 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 Gm27540-201ENSMUST00000184950 187 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 Gm28921-201ENSMUST00000190219 378 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
Ift88Q61371 Gm43722-201ENSMUST00000196054 124 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 Gm26265-202ENSMUST00000196326 133 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 Gm44977-201ENSMUST00000205283 420 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 Rny1-201ENSMUST00000083767 112 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
Ift88Q61371 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.7□□□□□ -1.98
Ift88Q61371 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Ift88Q61371 Gm26027-201ENSMUST00000122725 268 ntBASIC2.69□□□□□ -1.98
Ift88Q61371 Gm22027-201ENSMUST00000122737 127 ntBASIC2.69□□□□□ -1.98
Ift88Q61371 Gm16355-201ENSMUST00000128606 231 ntBASIC2.69□□□□□ -1.98
Ift88Q61371 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.69□□□□□ -1.98
Ift88Q61371 Gm23640-201ENSMUST00000157860 104 ntBASIC2.69□□□□□ -1.98
Ift88Q61371 Gm25490-201ENSMUST00000158734 130 ntBASIC2.69□□□□□ -1.98
Ift88Q61371 Gm2719-201ENSMUST00000191929 444 ntBASIC2.69□□□□□ -1.98
Ift88Q61371 Gm19901-201ENSMUST00000192191 495 ntBASIC2.69□□□□□ -1.98
Ift88Q61371 Gm44526-201ENSMUST00000204664 121 ntBASIC2.69□□□□□ -1.98
Ift88Q61371 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms