Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm24501-201ENSMUST00000158452 62 ntBASIC2.43□□□□□ -2.02
ClpbQ60649 Gm23003-201ENSMUST00000179948 107 ntBASIC2.43□□□□□ -2.02
ClpbQ60649 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC2.43□□□□□ -2.02
ClpbQ60649 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC2.43□□□□□ -2.02
ClpbQ60649 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.43□□□□□ -2.02
ClpbQ60649 Gm38019-201ENSMUST00000195133 380 ntBASIC2.43□□□□□ -2.02
ClpbQ60649 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.43□□□□□ -2.02
ClpbQ60649 Gm43264-201ENSMUST00000202284 325 ntBASIC2.43□□□□□ -2.02
ClpbQ60649 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.43□□□□□ -2.02
ClpbQ60649 Gm9174-201ENSMUST00000078149 255 ntBASIC2.43□□□□□ -2.02
ClpbQ60649 Gm25078-201ENSMUST00000082530 107 ntBASIC2.43□□□□□ -2.02
ClpbQ60649 Gm23055-201ENSMUST00000082805 94 ntBASIC2.43□□□□□ -2.02
ClpbQ60649 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
ClpbQ60649 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Snora36b-201ENSMUST00000104383 132 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm11862-201ENSMUST00000119678 659 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm6574-201ENSMUST00000120037 362 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm16355-201ENSMUST00000128606 231 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm23600-201ENSMUST00000157260 71 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm23381-201ENSMUST00000157676 94 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm25012-201ENSMUST00000158396 164 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm24922-201ENSMUST00000158511 102 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm25488-201ENSMUST00000158728 118 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm22500-201ENSMUST00000158982 99 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm27753-201ENSMUST00000184742 203 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm42594-201ENSMUST00000199511 246 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm45005-201ENSMUST00000206640 157 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.42□□□□□ -2.02
ClpbQ60649 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.42□□□□□ -2.02
ClpbQ60649 mt-Td-201ENSMUST00000082404 70 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm26447-201ENSMUST00000082448 129 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm25589-201ENSMUST00000082502 166 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.42□□□□□ -2.02
ClpbQ60649 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
ClpbQ60649 Gm23941-201ENSMUST00000101953 107 ntBASIC2.41□□□□□ -2.02
ClpbQ60649 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
ClpbQ60649 Gm24122-201ENSMUST00000104107 132 ntBASIC2.41□□□□□ -2.02
ClpbQ60649 Gm25111-201ENSMUST00000116686 147 ntBASIC2.41□□□□□ -2.02
ClpbQ60649 Gm24629-201ENSMUST00000122762 89 ntBASIC2.41□□□□□ -2.02
ClpbQ60649 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
ClpbQ60649 Gm22814-201ENSMUST00000157452 104 ntBASIC2.41□□□□□ -2.02
ClpbQ60649 Gm22483-201ENSMUST00000157986 274 ntBASIC2.41□□□□□ -2.02
ClpbQ60649 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
ClpbQ60649 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
ClpbQ60649 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
ClpbQ60649 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
ClpbQ60649 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
ClpbQ60649 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.4□□□□□ -2.02
ClpbQ60649 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
ClpbQ60649 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
ClpbQ60649 Gm25805-201ENSMUST00000122788 108 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 Gm23474-201ENSMUST00000158884 75 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 Gm25450-201ENSMUST00000179144 107 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 Gm28900-201ENSMUST00000185232 156 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 Gm28058-201ENSMUST00000186421 264 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 Gm29005-201ENSMUST00000186773 320 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 Gm28951-201ENSMUST00000190742 313 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 Gm45879-201ENSMUST00000212521 392 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.4□□□□□ -2.03
ClpbQ60649 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
ClpbQ60649 Gm26494-201ENSMUST00000083154 143 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 Gm24493-201ENSMUST00000083805 143 ntBASIC2.4□□□□□ -2.03
ClpbQ60649 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
ClpbQ60649 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
ClpbQ60649 Gm15526-201ENSMUST00000112504 204 ntBASIC2.39□□□□□ -2.03
ClpbQ60649 Mir1b-201ENSMUST00000117012 122 ntBASIC2.39□□□□□ -2.03
ClpbQ60649 Gm13885-201ENSMUST00000117569 187 ntBASIC2.39□□□□□ -2.03
ClpbQ60649 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.39□□□□□ -2.03
ClpbQ60649 Gm25888-201ENSMUST00000157778 302 ntBASIC2.39□□□□□ -2.03
ClpbQ60649 Gm24847-201ENSMUST00000158032 108 ntBASIC2.39□□□□□ -2.03
ClpbQ60649 Gm23581-201ENSMUST00000158531 63 ntBASIC2.39□□□□□ -2.03
ClpbQ60649 Mir3075-201ENSMUST00000175340 85 ntBASIC2.39□□□□□ -2.03
ClpbQ60649 Gm27271-201ENSMUST00000183509 170 ntBASIC2.39□□□□□ -2.03
ClpbQ60649 Gm29167-201ENSMUST00000190024 377 ntBASIC2.39□□□□□ -2.03
ClpbQ60649 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
ClpbQ60649 Gm19901-201ENSMUST00000192191 495 ntBASIC2.39□□□□□ -2.03
ClpbQ60649 Mir3535-201ENSMUST00000197651 147 ntBASIC2.39□□□□□ -2.03
ClpbQ60649 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.39□□□□□ -2.03
ClpbQ60649 Snord104-201ENSMUST00000083192 70 ntBASIC2.39□□□□□ -2.03
ClpbQ60649 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
ClpbQ60649 Gm12351-201ENSMUST00000118727 292 ntBASIC2.38□□□□□ -2.03
ClpbQ60649 Gm15213-201ENSMUST00000122098 216 ntBASIC2.38□□□□□ -2.03
ClpbQ60649 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.38□□□□□ -2.03
ClpbQ60649 Gm25059-201ENSMUST00000157367 117 ntBASIC2.38□□□□□ -2.03
ClpbQ60649 Gm24480-201ENSMUST00000157442 103 ntBASIC2.38□□□□□ -2.03
ClpbQ60649 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
ClpbQ60649 Gm24304-201ENSMUST00000177635 107 ntBASIC2.38□□□□□ -2.03
ClpbQ60649 Gm21827-201ENSMUST00000178247 423 ntBASIC2.38□□□□□ -2.03
ClpbQ60649 Gm25933-201ENSMUST00000178943 108 ntBASIC2.38□□□□□ -2.03
ClpbQ60649 Gm28627-201ENSMUST00000186141 453 ntBASIC2.38□□□□□ -2.03
ClpbQ60649 Trbv6-201ENSMUST00000193743 276 ntBASIC2.38□□□□□ -2.03
ClpbQ60649 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
ClpbQ60649 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.38□□□□□ -2.03
ClpbQ60649 Gm44182-201ENSMUST00000204052 115 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 124.4 ms