Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Gm17522-201ENSMUST00000178144 498 ntBASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Mir1291-201ENSMUST00000199842 117 ntBASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Gm18617-201ENSMUST00000222311 259 ntBASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 AC123860.1-201ENSMUST00000228033 481 ntBASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Gm22704-201ENSMUST00000083027 137 ntBASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Snora34-201ENSMUST00000083402 138 ntBASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 Gm26145-201ENSMUST00000104476 127 ntBASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 Gm22051-201ENSMUST00000117002 127 ntBASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 Gm11253-201ENSMUST00000118486 201 ntBASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 Gm24936-201ENSMUST00000122598 247 ntBASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 Snord92-201ENSMUST00000175548 85 ntBASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 Gm28992-201ENSMUST00000190534 139 ntBASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 Ighv1-28-201ENSMUST00000192987 351 ntBASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 Gm43199-201ENSMUST00000200019 307 ntBASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 Gm44084-201ENSMUST00000203947 409 ntBASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 AC114010.1-201ENSMUST00000222060 379 ntBASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Scaf1Q5U4C3 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Scaf1Q5U4C3 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Scaf1Q5U4C3 AC164164.1-201ENSMUST00000223245 2340 ntBASIC4.61□□□□□ -1.67
Scaf1Q5U4C3 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Scaf1Q5U4C3 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC4.61□□□□□ -1.67
Scaf1Q5U4C3 Gm15282-201ENSMUST00000117707 300 ntBASIC4.61□□□□□ -1.67
Scaf1Q5U4C3 Gm22483-201ENSMUST00000157986 274 ntBASIC4.61□□□□□ -1.67
Scaf1Q5U4C3 Gm37085-201ENSMUST00000193780 196 ntBASIC4.61□□□□□ -1.67
Scaf1Q5U4C3 Gm33866-201ENSMUST00000196911 289 ntBASIC4.61□□□□□ -1.67
Scaf1Q5U4C3 AC158631.1-201ENSMUST00000219202 138 ntBASIC4.61□□□□□ -1.67
Scaf1Q5U4C3 AC173115.1-201ENSMUST00000220835 211 ntBASIC4.61□□□□□ -1.67
Scaf1Q5U4C3 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Scaf1Q5U4C3 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC4.61□□□□□ -1.67
Scaf1Q5U4C3 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Scaf1Q5U4C3 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Scaf1Q5U4C3 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Scaf1Q5U4C3 Gm22658-201ENSMUST00000104196 155 ntBASIC4.6□□□□□ -1.67
Scaf1Q5U4C3 Gm22853-201ENSMUST00000174974 131 ntBASIC4.6□□□□□ -1.67
Scaf1Q5U4C3 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Scaf1Q5U4C3 Mir6993-201ENSMUST00000184912 65 ntBASIC4.6□□□□□ -1.67
Scaf1Q5U4C3 Gm27249-201ENSMUST00000185049 328 ntBASIC4.6□□□□□ -1.67
Scaf1Q5U4C3 Gm43563-201ENSMUST00000196761 198 ntBASIC4.6□□□□□ -1.67
Scaf1Q5U4C3 AC192091.2-201ENSMUST00000217869 117 ntBASIC4.6□□□□□ -1.67
Scaf1Q5U4C3 CT030687.1-201ENSMUST00000221854 162 ntBASIC4.6□□□□□ -1.67
Scaf1Q5U4C3 AF357428-201ENSMUST00000083815 69 ntBASIC4.6□□□□□ -1.67
Scaf1Q5U4C3 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Scaf1Q5U4C3 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Gm24118-201ENSMUST00000103972 126 ntBASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Gm23535-201ENSMUST00000157542 106 ntBASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Gm24015-201ENSMUST00000157725 232 ntBASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Gm23642-201ENSMUST00000157858 258 ntBASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Gm44425-201ENSMUST00000203739 429 ntBASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 AC154527.5-201ENSMUST00000224448 496 ntBASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Gm23297-201ENSMUST00000083184 127 ntBASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Scaf1Q5U4C3 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC4.59□□□□□ -1.68
Scaf1Q5U4C3 Gm42770-201ENSMUST00000199657 4155 ntBASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Gm25168-201ENSMUST00000104189 132 ntBASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Gm22193-201ENSMUST00000116868 76 ntBASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Gm23990-201ENSMUST00000117031 117 ntBASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Gm15861-201ENSMUST00000120979 339 ntBASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Gm25599-201ENSMUST00000157816 103 ntBASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Gm4479-201ENSMUST00000178807 171 ntBASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Gm37037-201ENSMUST00000194475 424 ntBASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Gm25813-201ENSMUST00000082748 191 ntBASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Gm25204-201ENSMUST00000082843 106 ntBASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Gm24533-201ENSMUST00000083138 196 ntBASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Gm23246-201ENSMUST00000083371 67 ntBASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Scaf1Q5U4C3 Gm13801-201ENSMUST00000120750 160 ntBASIC4.57□□□□□ -1.68
Scaf1Q5U4C3 Gm15190-201ENSMUST00000120855 276 ntBASIC4.57□□□□□ -1.68
Scaf1Q5U4C3 Gm25425-201ENSMUST00000157611 96 ntBASIC4.57□□□□□ -1.68
Scaf1Q5U4C3 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC4.57□□□□□ -1.68
Scaf1Q5U4C3 Mir28b-201ENSMUST00000175399 80 ntBASIC4.57□□□□□ -1.68
Scaf1Q5U4C3 Gm28030-201ENSMUST00000184987 138 ntBASIC4.57□□□□□ -1.68
Scaf1Q5U4C3 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC4.57□□□□□ -1.68
Scaf1Q5U4C3 Gm44964-201ENSMUST00000207011 273 ntBASIC4.57□□□□□ -1.68
Scaf1Q5U4C3 AC164086.1-201ENSMUST00000221038 289 ntBASIC4.57□□□□□ -1.68
Scaf1Q5U4C3 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scaf1Q5U4C3 AC153966.1-201ENSMUST00000220106 3764 ntBASIC4.57□□□□□ -1.68
Scaf1Q5U4C3 Gm37063-201ENSMUST00000194678 3520 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms