Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm23506-201ENSMUST00000083077 107 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Mir196b-201ENSMUST00000083509 85 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm23848-201ENSMUST00000083826 106 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm23754-201ENSMUST00000157576 63 ntBASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 Gm25707-201ENSMUST00000175120 96 ntBASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 Mir3079-201ENSMUST00000175428 90 ntBASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 Gm27964-201ENSMUST00000185195 62 ntBASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 Gm18971-201ENSMUST00000197240 374 ntBASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 Gm43513-201ENSMUST00000199779 1076 ntBASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 AC124569.1-201ENSMUST00000225932 101 ntBASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.01□□□□□ -2.41
Trav3-1Q5R1I8 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Mir293-201ENSMUST00000104841 80 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Gm15266-201ENSMUST00000119635 255 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Gm13967-201ENSMUST00000120404 380 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Gm23328-201ENSMUST00000157418 132 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Gm23538-201ENSMUST00000157535 101 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Gm25952-201ENSMUST00000175329 74 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Mir7663-201ENSMUST00000183950 61 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Gm25820-202ENSMUST00000197479 128 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Gm42755-201ENSMUST00000198533 1493 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Gm44125-201ENSMUST00000203068 448 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Gm45541-201ENSMUST00000210443 54 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 AC113305.1-201ENSMUST00000214664 724 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 AC153646.1-201ENSMUST00000223229 1279 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 AC122341.1-201ENSMUST00000227291 560 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Mir101a-201ENSMUST00000083517 83 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Gm24254-201ENSMUST00000083702 104 ntBASIC0□□□□□ -2.41
Trav3-1Q5R1I8 Gm23184-201ENSMUST00000122594 131 ntBASIC-0.01□□□□□ -2.41
Trav3-1Q5R1I8 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC-0.01□□□□□ -2.41
Trav3-1Q5R1I8 Mir3108-201ENSMUST00000175500 79 ntBASIC-0.01□□□□□ -2.41
Trav3-1Q5R1I8 Mir6382-201ENSMUST00000184055 110 ntBASIC-0.01□□□□□ -2.41
Trav3-1Q5R1I8 Gm27428-201ENSMUST00000184289 110 ntBASIC-0.01□□□□□ -2.41
Trav3-1Q5R1I8 Mir7081-201ENSMUST00000184490 75 ntBASIC-0.01□□□□□ -2.41
Trav3-1Q5R1I8 Gm28257-201ENSMUST00000185244 463 ntBASIC-0.01□□□□□ -2.41
Trav3-1Q5R1I8 Gm29513-201ENSMUST00000185741 202 ntBASIC-0.01□□□□□ -2.41
Trav3-1Q5R1I8 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC-0.01□□□□□ -2.41
Trav3-1Q5R1I8 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC-0.01□□□□□ -2.41
Trav3-1Q5R1I8 AC192334.2-201ENSMUST00000223087 1091 ntBASIC-0.01□□□□□ -2.41
Trav3-1Q5R1I8 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
Trav3-1Q5R1I8 Gm14846-201ENSMUST00000121868 216 ntBASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm22073-201ENSMUST00000122668 189 ntBASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm24080-201ENSMUST00000175178 232 ntBASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 Mir7665-201ENSMUST00000184907 63 ntBASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm37997-201ENSMUST00000193515 267 ntBASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm34073-201ENSMUST00000195736 212 ntBASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm33654-201ENSMUST00000221704 215 ntBASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 AC163295.1-201ENSMUST00000227840 314 ntBASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm25703-201ENSMUST00000083123 151 ntBASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 Mir19a-201ENSMUST00000083482 82 ntBASIC-0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm26339-201ENSMUST00000102368 99 ntBASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 Gm14946-201ENSMUST00000119859 296 ntBASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 Gm25269-201ENSMUST00000122601 104 ntBASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 Gm23391-201ENSMUST00000157579 104 ntBASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 Gm24784-201ENSMUST00000157640 62 ntBASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 Gm17100-201ENSMUST00000168963 272 ntBASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 Gm28408-201ENSMUST00000191557 463 ntBASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 AC163646.2-201ENSMUST00000227962 141 ntBASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 Gm24258-201ENSMUST00000083739 133 ntBASIC-0.03□□□□□ -2.41
Trav3-1Q5R1I8 Mir710-201ENSMUST00000102088 110 ntBASIC-0.04□□□□□ -2.42
Trav3-1Q5R1I8 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC-0.04□□□□□ -2.42
Trav3-1Q5R1I8 Gm14761-201ENSMUST00000121363 262 ntBASIC-0.04□□□□□ -2.42
Trav3-1Q5R1I8 Gm25224-201ENSMUST00000158195 68 ntBASIC-0.04□□□□□ -2.42
Trav3-1Q5R1I8 Gm23387-201ENSMUST00000158586 107 ntBASIC-0.04□□□□□ -2.42
Trav3-1Q5R1I8 Gm23777-201ENSMUST00000158994 259 ntBASIC-0.04□□□□□ -2.42
Trav3-1Q5R1I8 Gm2878-201ENSMUST00000170173 486 ntBASIC-0.04□□□□□ -2.42
Trav3-1Q5R1I8 Gm25956-201ENSMUST00000175115 217 ntBASIC-0.04□□□□□ -2.42
Trav3-1Q5R1I8 Mir3471-1-201ENSMUST00000175139 131 ntBASIC-0.04□□□□□ -2.42
Trav3-1Q5R1I8 Gm18617-201ENSMUST00000222311 259 ntBASIC-0.04□□□□□ -2.42
Trav3-1Q5R1I8 AC104832.1-201ENSMUST00000222938 550 ntBASIC-0.04□□□□□ -2.42
Trav3-1Q5R1I8 Gm30155-201ENSMUST00000223458 339 ntBASIC-0.04□□□□□ -2.42
Trav3-1Q5R1I8 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
Trav3-1Q5R1I8 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC-0.05□□□□□ -2.42
Trav3-1Q5R1I8 Gm15529-201ENSMUST00000121833 994 ntBASIC-0.05□□□□□ -2.42
Trav3-1Q5R1I8 Gm25294-201ENSMUST00000122791 104 ntBASIC-0.05□□□□□ -2.42
Trav3-1Q5R1I8 Gm24481-201ENSMUST00000157210 102 ntBASIC-0.05□□□□□ -2.42
Trav3-1Q5R1I8 Gm23078-201ENSMUST00000157848 148 ntBASIC-0.05□□□□□ -2.42
Trav3-1Q5R1I8 Gm23760-201ENSMUST00000158350 116 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms