Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 Gm13396-201ENSMUST00000120617 271 ntBASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 Gm15061-201ENSMUST00000121076 1046 ntBASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 Gm23034-201ENSMUST00000158001 147 ntBASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 Gm20386-201ENSMUST00000174010 132 ntBASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 Trbv22-201ENSMUST00000191697 291 ntBASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 Gm37089-201ENSMUST00000195616 129 ntBASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 Gm42164-201ENSMUST00000198881 379 ntBASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 Gm10264-201ENSMUST00000220589 429 ntBASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 Gm25851-201ENSMUST00000082794 107 ntBASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 Mir465-201ENSMUST00000093563 74 ntBASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Trav5d-4Q5R1F6 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 Gm22597-201ENSMUST00000157602 80 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 Gm25706-201ENSMUST00000157828 247 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 Gm10177-202ENSMUST00000161698 207 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 Mir3061-201ENSMUST00000175129 91 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 Gm27974-201ENSMUST00000183415 105 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 Gm27420-201ENSMUST00000183823 79 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 Gm37399-201ENSMUST00000195224 416 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 Gm18703-201ENSMUST00000215318 333 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 Gm40810-201ENSMUST00000219149 253 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.6□□□□□ -2.31
Trav5d-4Q5R1F6 Gm23422-201ENSMUST00000102000 107 ntBASIC0.59□□□□□ -2.31
Trav5d-4Q5R1F6 Gm12806-201ENSMUST00000119384 268 ntBASIC0.59□□□□□ -2.31
Trav5d-4Q5R1F6 Gm22477-201ENSMUST00000122569 316 ntBASIC0.59□□□□□ -2.31
Trav5d-4Q5R1F6 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.59□□□□□ -2.31
Trav5d-4Q5R1F6 Mir3109-201ENSMUST00000175301 88 ntBASIC0.59□□□□□ -2.31
Trav5d-4Q5R1F6 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.59□□□□□ -2.31
Trav5d-4Q5R1F6 Gm34073-201ENSMUST00000195736 212 ntBASIC0.59□□□□□ -2.31
Trav5d-4Q5R1F6 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC0.59□□□□□ -2.31
Trav5d-4Q5R1F6 Gm44870-201ENSMUST00000207291 357 ntBASIC0.59□□□□□ -2.31
Trav5d-4Q5R1F6 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
Trav5d-4Q5R1F6 Gm18242-201ENSMUST00000218455 542 ntBASIC0.59□□□□□ -2.31
Trav5d-4Q5R1F6 Gm9795-201ENSMUST00000062156 693 ntBASIC0.59□□□□□ -2.31
Trav5d-4Q5R1F6 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Gm22831-201ENSMUST00000102473 109 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Snord71-201ENSMUST00000104361 85 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Gm14638-201ENSMUST00000121338 216 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Gm25784-201ENSMUST00000122524 81 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Gm25011-201ENSMUST00000158398 126 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Gm8151-201ENSMUST00000184817 871 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Gm38231-201ENSMUST00000192030 347 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Gm43250-201ENSMUST00000196536 273 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Gm44487-201ENSMUST00000205145 325 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Gm5010-201ENSMUST00000213131 260 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 AC164304.1-201ENSMUST00000226920 272 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.58□□□□□ -2.32
Trav5d-4Q5R1F6 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Trav5d-4Q5R1F6 Gm22673-201ENSMUST00000104415 131 ntBASIC0.57□□□□□ -2.32
Trav5d-4Q5R1F6 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Trav5d-4Q5R1F6 Gm25491-201ENSMUST00000158733 308 ntBASIC0.57□□□□□ -2.32
Trav5d-4Q5R1F6 Mir5104-201ENSMUST00000175319 94 ntBASIC0.57□□□□□ -2.32
Trav5d-4Q5R1F6 Gm20689-201ENSMUST00000176033 279 ntBASIC0.57□□□□□ -2.32
Trav5d-4Q5R1F6 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Trav5d-4Q5R1F6 Gm24306-201ENSMUST00000180229 79 ntBASIC0.57□□□□□ -2.32
Trav5d-4Q5R1F6 Gm26968-201ENSMUST00000182894 481 ntBASIC0.57□□□□□ -2.32
Trav5d-4Q5R1F6 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.57□□□□□ -2.32
Trav5d-4Q5R1F6 Gm46997-201ENSMUST00000222108 217 ntBASIC0.57□□□□□ -2.32
Trav5d-4Q5R1F6 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.57□□□□□ -2.32
Trav5d-4Q5R1F6 Gm22543-201ENSMUST00000104347 94 ntBASIC0.56□□□□□ -2.32
Trav5d-4Q5R1F6 Gm23106-201ENSMUST00000157554 101 ntBASIC0.56□□□□□ -2.32
Trav5d-4Q5R1F6 Gm23340-201ENSMUST00000158955 123 ntBASIC0.56□□□□□ -2.32
Trav5d-4Q5R1F6 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Trav5d-4Q5R1F6 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.56□□□□□ -2.32
Trav5d-4Q5R1F6 Gm42475-201ENSMUST00000201212 295 ntBASIC0.56□□□□□ -2.32
Trav5d-4Q5R1F6 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.56□□□□□ -2.32
Trav5d-4Q5R1F6 Gm45375-201ENSMUST00000210338 280 ntBASIC0.56□□□□□ -2.32
Trav5d-4Q5R1F6 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.56□□□□□ -2.32
Trav5d-4Q5R1F6 Gm24920-201ENSMUST00000083018 85 ntBASIC0.56□□□□□ -2.32
Trav5d-4Q5R1F6 Gm25578-201ENSMUST00000083406 104 ntBASIC0.56□□□□□ -2.32
Trav5d-4Q5R1F6 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
Trav5d-4Q5R1F6 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
Trav5d-4Q5R1F6 Gm11572-201ENSMUST00000119164 120 ntBASIC0.55□□□□□ -2.32
Trav5d-4Q5R1F6 Gm17100-201ENSMUST00000168963 272 ntBASIC0.55□□□□□ -2.32
Trav5d-4Q5R1F6 Gm23355-201ENSMUST00000177614 107 ntBASIC0.55□□□□□ -2.32
Trav5d-4Q5R1F6 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav5d-4Q5R1F6 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav5d-4Q5R1F6 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav5d-4Q5R1F6 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav5d-4Q5R1F6 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Trav5d-4Q5R1F6 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.55□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms