Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm28579-201ENSMUST00000186143 369 ntBASIC-0.5□□□□□ -2.49
Ccdc88bQ4QRL3 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC-0.5□□□□□ -2.49
Ccdc88bQ4QRL3 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC-0.5□□□□□ -2.49
Ccdc88bQ4QRL3 CT485612.4-201ENSMUST00000223405 250 ntBASIC-0.5□□□□□ -2.49
Ccdc88bQ4QRL3 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC-0.5□□□□□ -2.49
Ccdc88bQ4QRL3 Gm13378-201ENSMUST00000117483 336 ntBASIC-0.51□□□□□ -2.49
Ccdc88bQ4QRL3 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
Ccdc88bQ4QRL3 Gm22769-201ENSMUST00000158367 98 ntBASIC-0.52□□□□□ -2.49
Ccdc88bQ4QRL3 Gm16539-201ENSMUST00000160086 327 ntBASIC-0.52□□□□□ -2.49
Ccdc88bQ4QRL3 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.52□□□□□ -2.49
Ccdc88bQ4QRL3 Ighv2-8-201ENSMUST00000193935 262 ntBASIC-0.52□□□□□ -2.49
Ccdc88bQ4QRL3 Gm44396-201ENSMUST00000199843 114 ntBASIC-0.52□□□□□ -2.49
Ccdc88bQ4QRL3 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC-0.52□□□□□ -2.49
Ccdc88bQ4QRL3 Gm18703-201ENSMUST00000215318 333 ntBASIC-0.52□□□□□ -2.49
Ccdc88bQ4QRL3 AC159380.1-201ENSMUST00000218096 121 ntBASIC-0.52□□□□□ -2.49
Ccdc88bQ4QRL3 Gm24861-201ENSMUST00000083459 107 ntBASIC-0.52□□□□□ -2.49
Ccdc88bQ4QRL3 Gm23130-201ENSMUST00000104252 74 ntBASIC-0.53□□□□□ -2.49
Ccdc88bQ4QRL3 Gm23106-201ENSMUST00000157554 101 ntBASIC-0.53□□□□□ -2.49
Ccdc88bQ4QRL3 Gm24997-201ENSMUST00000157910 105 ntBASIC-0.53□□□□□ -2.49
Ccdc88bQ4QRL3 Gm24464-201ENSMUST00000179697 107 ntBASIC-0.53□□□□□ -2.49
Ccdc88bQ4QRL3 Gm28597-201ENSMUST00000187664 666 ntBASIC-0.53□□□□□ -2.49
Ccdc88bQ4QRL3 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC-0.53□□□□□ -2.49
Ccdc88bQ4QRL3 Gm30155-201ENSMUST00000223458 339 ntBASIC-0.53□□□□□ -2.49
Ccdc88bQ4QRL3 AC131085.1-201ENSMUST00000224746 656 ntBASIC-0.53□□□□□ -2.49
Ccdc88bQ4QRL3 Gm14917-201ENSMUST00000118872 2105 ntBASIC-0.53□□□□□ -2.49
Ccdc88bQ4QRL3 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm45315-201ENSMUST00000209283 333 ntBASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 AC172027.1-201ENSMUST00000217659 337 ntBASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm13885-201ENSMUST00000117569 187 ntBASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm14782-201ENSMUST00000120151 195 ntBASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm15309-201ENSMUST00000121644 240 ntBASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm14530-201ENSMUST00000122391 333 ntBASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Mir3079-201ENSMUST00000175428 90 ntBASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 AC127302.1-201ENSMUST00000215973 1111 ntBASIC-0.54□□□□□ -2.5
Ccdc88bQ4QRL3 Gm14491-201ENSMUST00000121919 199 ntBASIC-0.55□□□□□ -2.5
Ccdc88bQ4QRL3 Gm15167-201ENSMUST00000121997 187 ntBASIC-0.55□□□□□ -2.5
Ccdc88bQ4QRL3 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
Ccdc88bQ4QRL3 Mir3061-201ENSMUST00000175129 91 ntBASIC-0.55□□□□□ -2.5
Ccdc88bQ4QRL3 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC-0.55□□□□□ -2.5
Ccdc88bQ4QRL3 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC-0.55□□□□□ -2.5
Ccdc88bQ4QRL3 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC-0.55□□□□□ -2.5
Ccdc88bQ4QRL3 Gm19855-201ENSMUST00000210145 249 ntBASIC-0.55□□□□□ -2.5
Ccdc88bQ4QRL3 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.55□□□□□ -2.5
Ccdc88bQ4QRL3 AC188459.1-201ENSMUST00000216651 300 ntBASIC-0.55□□□□□ -2.5
Ccdc88bQ4QRL3 Gm23932-201ENSMUST00000082914 107 ntBASIC-0.55□□□□□ -2.5
Ccdc88bQ4QRL3 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.56□□□□□ -2.5
Ccdc88bQ4QRL3 AC124426.1-203ENSMUST00000221814 1362 ntBASIC-0.56□□□□□ -2.5
Ccdc88bQ4QRL3 Gm23656-201ENSMUST00000122626 112 ntBASIC-0.56□□□□□ -2.5
Ccdc88bQ4QRL3 Gm22520-201ENSMUST00000158269 129 ntBASIC-0.56□□□□□ -2.5
Ccdc88bQ4QRL3 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.56□□□□□ -2.5
Ccdc88bQ4QRL3 Gm37693-201ENSMUST00000194562 234 ntBASIC-0.56□□□□□ -2.5
Ccdc88bQ4QRL3 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC-0.56□□□□□ -2.5
Ccdc88bQ4QRL3 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.56□□□□□ -2.5
Ccdc88bQ4QRL3 Gm15719-201ENSMUST00000120619 635 ntBASIC-0.57□□□□□ -2.5
Ccdc88bQ4QRL3 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.57□□□□□ -2.5
Ccdc88bQ4QRL3 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC-0.57□□□□□ -2.5
Ccdc88bQ4QRL3 Gm44488-201ENSMUST00000199467 119 ntBASIC-0.57□□□□□ -2.5
Ccdc88bQ4QRL3 Gm11512-201ENSMUST00000119669 663 ntBASIC-0.58□□□□□ -2.5
Ccdc88bQ4QRL3 Gm22027-201ENSMUST00000122737 127 ntBASIC-0.58□□□□□ -2.5
Ccdc88bQ4QRL3 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC-0.58□□□□□ -2.5
Ccdc88bQ4QRL3 Gm22236-201ENSMUST00000157093 106 ntBASIC-0.58□□□□□ -2.5
Ccdc88bQ4QRL3 Gm16588-201ENSMUST00000162889 355 ntBASIC-0.58□□□□□ -2.5
Ccdc88bQ4QRL3 Gm24573-201ENSMUST00000175499 112 ntBASIC-0.58□□□□□ -2.5
Ccdc88bQ4QRL3 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.58□□□□□ -2.5
Ccdc88bQ4QRL3 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.58□□□□□ -2.5
Ccdc88bQ4QRL3 Gm3702-201ENSMUST00000211754 346 ntBASIC-0.58□□□□□ -2.5
Ccdc88bQ4QRL3 AC112274.2-201ENSMUST00000218436 170 ntBASIC-0.58□□□□□ -2.5
Ccdc88bQ4QRL3 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC-0.58□□□□□ -2.5
Ccdc88bQ4QRL3 AC154636.2-201ENSMUST00000222538 161 ntBASIC-0.58□□□□□ -2.5
Ccdc88bQ4QRL3 Gm26263-201ENSMUST00000083281 164 ntBASIC-0.58□□□□□ -2.5
Ccdc88bQ4QRL3 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.59□□□□□ -2.5
Ccdc88bQ4QRL3 Mir6372-201ENSMUST00000185114 109 ntBASIC-0.59□□□□□ -2.5
Ccdc88bQ4QRL3 Gm28825-201ENSMUST00000186233 238 ntBASIC-0.59□□□□□ -2.5
Ccdc88bQ4QRL3 AC125167.1-201ENSMUST00000198698 141 ntBASIC-0.59□□□□□ -2.5
Ccdc88bQ4QRL3 Gm43345-201ENSMUST00000199484 269 ntBASIC-0.59□□□□□ -2.5
Ccdc88bQ4QRL3 Gm45673-201ENSMUST00000210293 358 ntBASIC-0.59□□□□□ -2.5
Ccdc88bQ4QRL3 Gm45815-201ENSMUST00000220241 146 ntBASIC-0.59□□□□□ -2.5
Ccdc88bQ4QRL3 n-R5s192-201ENSMUST00000122577 119 ntBASIC-0.6□□□□□ -2.5
Ccdc88bQ4QRL3 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC-0.6□□□□□ -2.5
Ccdc88bQ4QRL3 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC-0.6□□□□□ -2.5
Ccdc88bQ4QRL3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC-0.6□□□□□ -2.5
Ccdc88bQ4QRL3 Gm37128-201ENSMUST00000192599 232 ntBASIC-0.6□□□□□ -2.5
Ccdc88bQ4QRL3 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC-0.6□□□□□ -2.5
Ccdc88bQ4QRL3 Gm43897-201ENSMUST00000204019 309 ntBASIC-0.6□□□□□ -2.5
Ccdc88bQ4QRL3 AC139294.2-201ENSMUST00000227159 285 ntBASIC-0.6□□□□□ -2.5
Ccdc88bQ4QRL3 Gm22443-201ENSMUST00000082890 107 ntBASIC-0.6□□□□□ -2.5
Ccdc88bQ4QRL3 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC-0.6□□□□□ -2.5
Ccdc88bQ4QRL3 Gm14937-201ENSMUST00000119709 208 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms