Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm25384-201ENSMUST00000157807 105 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Gm23557-201ENSMUST00000157820 138 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Gm25457-201ENSMUST00000179509 107 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Gm18356-201ENSMUST00000185677 623 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Gm43911-201ENSMUST00000203097 76 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Gm40810-201ENSMUST00000219149 253 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 CT010505.1-201ENSMUST00000227026 396 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 AC163646.2-201ENSMUST00000227962 141 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Gm24623-201ENSMUST00000082616 194 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Gm26265-201ENSMUST00000083277 135 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Gm23453-201ENSMUST00000083326 106 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Gm24412-201ENSMUST00000083426 109 ntBASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Upf3aQ3ULJ3 Gm25054-201ENSMUST00000157370 97 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 Gm22603-201ENSMUST00000157603 96 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 Gm24388-201ENSMUST00000177872 107 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 Gm21815-201ENSMUST00000178213 664 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 Gm20874-201ENSMUST00000178356 663 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 Mir7665-201ENSMUST00000184907 63 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 Gm44128-201ENSMUST00000204909 219 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 Gm25579-201ENSMUST00000083407 106 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 Gm3867-201ENSMUST00000086108 279 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.63□□□□□ -2.15
Upf3aQ3ULJ3 Gm22678-201ENSMUST00000116974 101 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Gm11359-201ENSMUST00000120039 567 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Gm22654-201ENSMUST00000157874 105 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Mir6355-201ENSMUST00000183687 106 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Gm42570-201ENSMUST00000195937 292 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Gm43367-201ENSMUST00000199986 625 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Gm44564-201ENSMUST00000207985 180 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Gm45315-201ENSMUST00000209283 333 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Gm45754-201ENSMUST00000212380 279 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 AC164297.5-201ENSMUST00000224365 198 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.62□□□□□ -2.15
Upf3aQ3ULJ3 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Mir873a-201ENSMUST00000104863 77 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm13714-201ENSMUST00000117313 221 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm13672-201ENSMUST00000117554 459 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm14287-201ENSMUST00000121060 117 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm24379-201ENSMUST00000122695 86 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm24892-201ENSMUST00000122747 104 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm23169-201ENSMUST00000157157 112 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm25012-201ENSMUST00000158396 164 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm24174-201ENSMUST00000158933 111 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm22800-201ENSMUST00000175627 94 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm21754-201ENSMUST00000177550 479 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm9830-201ENSMUST00000178509 357 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm27894-201ENSMUST00000184177 92 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm28925-201ENSMUST00000188586 168 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm25801-201ENSMUST00000082638 106 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm24406-201ENSMUST00000083026 128 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.61□□□□□ -2.15
Upf3aQ3ULJ3 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Upf3aQ3ULJ3 Gm24338-201ENSMUST00000104205 127 ntBASIC1.6□□□□□ -2.15
Upf3aQ3ULJ3 Snord98-201ENSMUST00000116819 65 ntBASIC1.6□□□□□ -2.15
Upf3aQ3ULJ3 Gm14624-201ENSMUST00000117746 192 ntBASIC1.6□□□□□ -2.15
Upf3aQ3ULJ3 Gm15030-201ENSMUST00000119804 484 ntBASIC1.6□□□□□ -2.15
Upf3aQ3ULJ3 Gm14269-201ENSMUST00000120455 306 ntBASIC1.6□□□□□ -2.15
Upf3aQ3ULJ3 Gm25269-201ENSMUST00000122601 104 ntBASIC1.6□□□□□ -2.15
Upf3aQ3ULJ3 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.6□□□□□ -2.15
Upf3aQ3ULJ3 Gm24222-201ENSMUST00000158834 93 ntBASIC1.6□□□□□ -2.15
Upf3aQ3ULJ3 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.6□□□□□ -2.15
Upf3aQ3ULJ3 Gm37845-201ENSMUST00000194977 355 ntBASIC1.6□□□□□ -2.15
Upf3aQ3ULJ3 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.6□□□□□ -2.15
Upf3aQ3ULJ3 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms